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UniProtKB/Swiss-Prot entry P0C0L0


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name APX5_ORYSJ
Primary accession number P0C0L0
Secondary accession numbers None
Integrated into Swiss-Prot on October 25, 2005
Sequence was last modified on October 25, 2005 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 22)
Name and origin of the protein
Protein name Probable L-ascorbate peroxidase 5, chloroplastic [Precursor]
Synonyms EC 1.11.1.11
OsAPx05
Gene name
Name: APX5
OrderedLocusNames: Os12g0178200, LOC_Os12g07830
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1186/1741-7007-3-20; PubMed=16188032 [NCBI, ExPASy, EBI, Israel, Japan]
The rice chromosomes 11 and 12 sequencing consortia;
"The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications.";
BMC Biol. 3:20-20(2005).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Nipponbare;
DOI=10.1126/science.1081288; PubMed=12869764 [NCBI, ExPASy, EBI, Israel, Japan]
The rice full-length cDNA consortium;
"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.";
Science 301:376-379(2003).
[3]
NOMENCLATURE.
DOI=10.1007/s00239-004-2666-z; PubMed=15599508 [NCBI, ExPASy, EBI, Israel, Japan]
Teixeira F.K., Menezes-Benavente L., Margis R., Margis-Pinheiro M.;
"Analysis of the molecular evolutionary history of the ascorbate peroxidase gene family: inferences from the rice genome.";
J. Mol. Evol. 59:761-770(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AL732376; -; NOT_ANNOTATED_CDS; Genomic_DNA.[EMBL / GenBank / DDBJ]
AK073910; -; NOT_ANNOTATED_CDS; mRNA.[EMBL / GenBank / DDBJ]
RefSeq NP_001066306.1; -.
UniGene Os.18504
3D structure databases
SMR P0C0L0; 47-320.
ModBase P0C0L0.
Organism-specific databases
Gramene P0C0L0; -.
Ontologies
GO
GO:0016688; Molecular function: L-ascorbate peroxidase activity (inferred from electronic annotation from EC).
QuickGo view.
Family and domain databases
InterPro IPR002207; Asc_perxdse.
IPR002016; Haem_peroxidase_pln/fun/bac.
Graphical view of domain structure.
Pfam PF00141; peroxidase; 1.
Pfam graphical view of domain structure.
PRINTS PR00459; ASPEROXIDASE.
PR00458; PEROXIDASE.
PROSITE PS00435; PEROXIDASE_1; 1.
PS00436; PEROXIDASE_2; FALSE_NEG.
PS50873; PEROXIDASE_4; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P0C0L0.
Genome annotation databases
GeneID 4351664; -.
KEGG osa:4351664; -.
Other
ProtoNet P0C0L0.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Chloroplast; Heme; Hydrogen peroxide; Iron; Metal-binding; Oxidoreductase; Peroxidase; Plastid; Potassium; Transit peptide.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
TRANSIT   1    42  42     Chloroplast (Potential). 
CHAIN   43   320  278     Probable L-ascorbate peroxidase 5, chloroplastic. PRO_0000042655
ACT_SITE   80    80        Proton acceptor (By similarity). 
METAL   209   209        Iron (heme axial ligand) (By similarity). 
METAL   210   210        Potassium or calcium (By similarity). 
METAL   242   242        Potassium or calcium (By similarity). 
METAL   249   249        Potassium or calcium (By similarity). 
SITE   76    76  1     Transition state stabilizer (By similarity). 
CONFLICT   181   181        P -> Q (in Ref. 2). 
Sequence information
Length: 320 AA [This is the length of the unprocessed precursor] Molecular weight: 34759 Da [This is the MW of the unprocessed precursor] CRC64: FE8CD65D291ACB2A [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAVVHRILRR GLSAASPLPS LRGLLLVSPQ ELGRRPASSS SSAAAAAGDV EAELRAARED 

        70         80         90        100        110        120 
VRQLLKSNPC HPILVRLGWH DAGTYDKNIT EWPKCGGANG SLRFGVELVH AANKGLLKAL 

       130        140        150        160        170        180 
FLVIPIKSKY AGVTYADIFQ LASATAIEEA GGPKIPMIYG RADVADGEEC PPEGRLPAAD 

       190        200        210        220        230        240 
PPSPAEHLRE VFYRMGLSDK EIVALSGAHT LGRARPERSG WGKPETKYTE NGPGAPGGQS 

       250        260        270        280        290        300 
WTSEWLKFDN SYFKEIKERR DEDLLVLPTD AVLFEDSSFK IHAEKYAEDQ DAFFEDYAEA 

       310        320 
HAKLSNLGAK FDPPKGISLE 

P0C0L0 in FASTA format

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