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UniProtKB/Swiss-Prot entry P00374


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DYR_HUMAN
Primary accession number P00374
Secondary accession numbers Q14130 Q6IRW8
Integrated into Swiss-Prot on July 21, 1986
Sequence was last modified on January 23, 2007 (Sequence version 2)
Annotations were last modified on    June 16, 2009 (Entry version 109)
Name and origin of the protein
Protein name Dihydrofolate reductase
Synonym EC 1.5.1.3
Gene names
Name: DHFR
and
Name: DHFRP1
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=6323448 [NCBI, ExPASy, EBI, Israel, Japan]
Chen M.-J., Shimada T., Moulton A.D., Cline A., Humphries R.K., Maizel J., Nienhuis A.W.;
"The functional human dihydrofolate reductase gene.";
J. Biol. Chem. 259:3933-3943(1984).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1016/0378-1119(83)90147-6; PubMed=6687716 [NCBI, ExPASy, EBI, Israel, Japan]
Masters J.N., Attardi G.;
"The nucleotide sequence of the cDNA coding for the human dihydrofolic acid reductase.";
Gene 21:59-63(1983).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1016/0022-2836(84)90419-4; PubMed=6235374 [NCBI, ExPASy, EBI, Israel, Japan]
Yang J.K., Masters J.N., Attardi G.;
"Human dihydrofolate reductase gene organization. Extensive conservation of the G + C-rich 5' non-coding sequence and strong intron size divergence from homologous mammalian genes.";
J. Mol. Biol. 176:169-187(1984).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Eye;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[5]
IDENTIFICATION [LARGE SCALE ANALYSIS], AND MASS SPECTROMETRY.
Colinge J., Superti-Furga G., Bennett K.L.;
Submitted (OCT-2008) to UniProtKB.
[6]
X-RAY CRYSTALLOGRAPHY (2.0 ANGSTROMS).
DOI=10.1111/j.1432-1033.1988.tb14108.x; PubMed=3383852 [NCBI, ExPASy, EBI, Israel, Japan]
Oefner C., D'Arcy A., Winkler F.K.;
"Crystal structure of human dihydrofolate reductase complexed with folate.";
Eur. J. Biochem. 174:377-385(1988).
[7]
X-RAY CRYSTALLOGRAPHY (2.3 ANGSTROMS).
DOI=10.1021/bi00492a021; PubMed=2248959 [NCBI, ExPASy, EBI, Israel, Japan]
Davies J.F., Delcamp T.J., Prendergast N.J., Ashford V.A., Freisheim J.H., Kraut J.;
"Crystal structures of recombinant human dihydrofolate reductase complexed with folate and 5-deazafolate.";
Biochemistry 29:9467-9479(1990).
[8]
X-RAY CRYSTALLOGRAPHY (2.1 ANGSTROMS).
DOI=10.1021/bi971711l; PubMed=9374868 [NCBI, ExPASy, EBI, Israel, Japan]
Cody V., Galitsky N., Luft J.R., Pangborn W., Blakley R.L., Gangjee A.;
"Comparison of two independent crystal structures of human dihydrofolate reductase ternary complexes reduced with nicotinamide adenine dinucleotide phosphate and the very tight-binding inhibitor PT523.";
Biochemistry 36:13897-13903(1997).
[9]
STRUCTURE BY NMR.
DOI=10.1021/bi00116a031; PubMed=1731871 [NCBI, ExPASy, EBI, Israel, Japan]
Stockman B.J., Nirmala N.R., Wagner G., Delcamp T.J., Deyarman M.T., Freisheim J.H.;
"Sequence-specific 1H and 15N resonance assignments for human dihydrofolate reductase in solution.";
Biochemistry 31:218-229(1992).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
J00140; AAA58485.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
V00507; CAA23765.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
J00139; AAA58484.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
K01612; AAA58484.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
K01613; AAA58484.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
J00138; AAA58484.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
K01614; AAA58484.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X00855; CAA25409.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X00856; CAA25409.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X00857; CAA25409.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X00858; CAA25409.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X00859; CAA25409.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC000192; AAH00192.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC003584; AAH03584.2; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC070280; AAH70280.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC071996; AAH71996.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00030357; -.
PIR A22551; RDHUD.
RefSeq NP_000782.1; -.
UniGene Hs.592364
3D structure databases
PDB
1BOZ; X-ray; 2.10 A; A=2-187.[ExPASy / RCSB / EBI]
1DHF; X-ray; 2.30 A; A/B=2-187.[ExPASy / RCSB / EBI]
1DLR; X-ray; 2.30 A; A=2-186.[ExPASy / RCSB / EBI]
1DLS; X-ray; 2.30 A; A=2-186.[ExPASy / RCSB / EBI]
1DRF; X-ray; 2.00 A; A=2-187.[ExPASy / RCSB / EBI]
1HFP; X-ray; 2.10 A; A=2-186.[ExPASy / RCSB / EBI]
1HFQ; X-ray; 2.10 A; A=2-186.[ExPASy / RCSB / EBI]
1HFR; X-ray; 2.10 A; A=2-186.[ExPASy / RCSB / EBI]
1KMS; X-ray; 1.09 A; A=2-186.[ExPASy / RCSB / EBI]
1KMV; X-ray; 1.05 A; A=2-186.[ExPASy / RCSB / EBI]
1MVS; X-ray; 1.90 A; A=1-187.[ExPASy / RCSB / EBI]
1MVT; X-ray; 1.80 A; A=1-187.[ExPASy / RCSB / EBI]
1OHJ; X-ray; 2.50 A; A=2-187.[ExPASy / RCSB / EBI]
1OHK; X-ray; 2.50 A; A=2-187.[ExPASy / RCSB / EBI]
1PD8; X-ray; 2.10 A; A=2-186.[ExPASy / RCSB / EBI]
1PD9; X-ray; 2.20 A; A=2-186.[ExPASy / RCSB / EBI]
1PDB; X-ray; 2.20 A; A=2-186.[ExPASy / RCSB / EBI]
1S3U; X-ray; 2.50 A; A=2-186.[ExPASy / RCSB / EBI]
1S3V; X-ray; 1.80 A; A=2-186.[ExPASy / RCSB / EBI]
1S3W; X-ray; 1.90 A; A=2-186.[ExPASy / RCSB / EBI]
1U71; X-ray; 2.20 A; A=2-186.[ExPASy / RCSB / EBI]
1U72; X-ray; 1.90 A; A=2-186.[ExPASy / RCSB / EBI]
1YHO; NMR; -; A=2-186.[ExPASy / RCSB / EBI]
2C2S; X-ray; 1.40 A; A/B=2-186.[ExPASy / RCSB / EBI]
2C2T; X-ray; 1.50 A; A/B=2-186.[ExPASy / RCSB / EBI]
2DHF; X-ray; 2.30 A; A/B=2-187.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1BOZ; -.
1DHF; -.
1DLR; -.
1DLS; -.
1DRF; -.
1HFP; -.
1HFQ; -.
1HFR; -.
1KMS; -.
1KMV; -.
1MVS; -.
1MVT; -.
1OHJ; -.
1OHK; -.
1PD8; -.
1PD9; -.
1PDB; -.
1S3U; -.
1S3V; -.
1S3W; -.
1U71; -.
1U72; -.
1YHO; -.
2C2S; -.
2C2T; -.
2DHF; -.
ModBase P00374.
PTM databases
PhosphoSite P00374; -.
Enzyme and pathway databases
BRENDA 1.5.1.3; 247.
Reactome REACT_11193; Metabolism of vitamins and cofactors.
REACT_152; Cell Cycle, Mitotic.
2D gel databases
HSC-2DPAGE P00374; -.
Organism-specific databases
GeneCards GC05M079957; -.
GC18M022002; -.
H-InvDB HIX0004995; -.
HIX0021723; -.
HIX0059796; -.
HGNC HGNC:2861; DHFR.
HGNC:2862; DHFRP1.
GenAtlas DHFR.
MIM 126060; gene+phenotype. [NCBI / EBI]
Orphanet 35858; Graesbeck-Imerslund disease.
PharmGKB PA143; -.
Gene expression databases
ArrayExpress P00374; -.
Bgee P00374; -.
CleanEx HS_DHFR; -.
GermOnline ENSG00000188985; Homo sapiens.
Ontologies
GO
GO:0004146; Molecular function: dihydrofolate reductase activity (non-traceable author statement from UniProtKB).
GO:0050661; Molecular function: NADP or NADPH binding (inferred from electronic annotation from InterPro).
GO:0006545; Biological process: glycine biosynthetic process (non-traceable author statement from UniProtKB).
GO:0009165; Biological process: nucleotide biosynthetic process (non-traceable author statement from UniProtKB).
GO:0006730; Biological process: one-carbon compound metabolic process (inferred from electronic annotation from UniProtKB-KW).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR012259; DHFR.
IPR001796; DHFR_reg.
IPR017925; Dihydrofolate_reductase_CS.
Graphical view of domain structure.
Pfam PF00186; DHFR_1; 1.
Pfam graphical view of domain structure.
PRINTS PR00070; DHFR.
PROSITE PS00075; DHFR_1; 1.
PS51330; DHFR_2; 1.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
Ensembl ENSG00000188985; Homo sapiens. [Contig view]
GeneID 1719; -.
KEGG hsa:1719; -.
Phylogenomic databases
HOGENOM P00374; -.
HOVERGEN P00374; -.
OMA P00374; LAHFKRT.
Other
BindingDB P00374; -.
DrugBank DB00250; Dapsone.
DB01093; Dimethyl sulfoxide.
DB00555; Lamotrigine.
DB00563; Methotrexate.
DB00157; NADH.
DB00642; Pemetrexed.
DB01131; Proguanil.
DB00205; Pyrimethamine.
DB00440; Trimethoprim.
DB01157; Trimetrexate.
NextBio 6964; -.
SOURCE DHFR; Homo sapiens.
ProtoNet P00374.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; NADP; One-carbon metabolism; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   187  186     Dihydrofolate reductase. PRO_0000186362
DOMAIN   4   185  182     DHFR. 
CONFLICT   113   113        V -> L (in Ref. 4; AAH70280). 
STRAND   5    11  7      
STRAND   16    19  4      
HELIX   29    40  12      
STRAND   48    54  7      
HELIX   55    60  6      
HELIX   63    65  3      
STRAND   71    76  6      
STRAND   88    93  6      
HELIX   94   101  8      
TURN   104   109  6      
STRAND   110   115  6      
HELIX   119   125  7      
STRAND   132   139  8      
STRAND   146   148  3      
TURN   154   156  3      
STRAND   157   159  3      
STRAND   171   173  3      
STRAND   176   185  10      
Sequence information
Length: 187 AA [This is the length of the unprocessed precursor] Molecular weight: 21453 Da [This is the MW of the unprocessed precursor] CRC64: EBDF3D1EC73E1566 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MVGSLNCIVA VSQNMGIGKN GDLPWPPLRN EFRYFQRMTT TSSVEGKQNL VIMGKKTWFS 

        70         80         90        100        110        120 
IPEKNRPLKG RINLVLSREL KEPPQGAHFL SRSLDDALKL TEQPELANKV DMVWIVGGSS 

       130        140        150        160        170        180 
VYKEAMNHPG HLKLFVTRIM QDFESDTFFP EIDLEKYKLL PEYPGVLSDV QEEKGIKYKF 


EVYEKND 

P00374 in FASTA format

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