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UniProtKB/Swiss-Prot entry A7N2P9

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name BETA_VIBHB
Primary accession number A7N2P9
Secondary accession numbers None
Integrated into Swiss-Prot on January 15, 2008
Sequence was last modified on October 2, 2007 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 9)
Name and origin of the protein
Protein name Choline dehydrogenase
Synonyms CHD
CDH
EC 1.1.99.1
Gene name
Name: betA
OrderedLocusNames: VIBHAR_06179
From
Vibrio harveyi (strain ATCC BAA-1116 / BB120) [TaxID: 338187] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Bassler B., Clifton S.W., Fulton L., Delehaunty K., Fronick C., Harrison M., Markivic C., Fulton R., Tin-Wollam A.-M., Shah N., Pepin K., Nash W., Thiruvilangam P., Bhonagiri V., Waters C., Tu K.C., Irgon J., Wilson R.K.;
Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000790; ABU74071.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_001448298.1; -.
3D structure databases
ModBase A7N2P9.
Ontologies
GO
GO:0008812; Molecular function: choline dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0019285; Biological process: glycine betaine biosynthetic process from choline (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00750; -; 1.
PBIL [Tree]
InterPro IPR011533; Choline_dehydrogenase.
IPR012132; GMC_OxRdtase.
IPR000172; GMC_OxRdtase_N.
IPR007867; GMC_OxRtase_C.
Graphical view of domain structure.
Pfam PF05199; GMC_oxred_C; 1.
PF00732; GMC_oxred_N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000137; Alcohol_oxidase; 1.
TIGRFAMs TIGR01810; betA; 1.
PROSITE PS00623; GMC_OXRED_1; 1.
PS00624; GMC_OXRED_2; FALSE_NEG.
BLOCKS A7N2P9.
Genome annotation databases
GeneID 5558185; -.
GenomeReviews CP000790_GR; VIBHAR_06179.
KEGG vha:VIBHAR_06179; -.
NMPDR fig|338187.4.peg.3647; -.
CMR A7N2P9; VIBHAR_06179.
Other
ProtoNet A7N2P9.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   569  569     Choline dehydrogenase. PRO_1000046574
NP_BIND   6    35  30     FAD (Probable). 
ACT_SITE   470   470        By similarity. 
Sequence information
Length: 569 AA [This is the length of the unprocessed precursor] Molecular weight: 62529 Da [This is the MW of the unprocessed precursor] CRC64: 38EEEB2710D68C15 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MQQHYDYIIV GAGSAGCVLA DRLSESGQHQ VLLLEAGGSD KSIFIQMPTA LSYPMNTEKY 

        70         80         90        100        110        120 
AWQFETVAEE GLDGRQLHCP RGKVLGGSSS INGMVYVRGH ACDFDEWEAE GAKGWNYQAC 

       130        140        150        160        170        180 
LPYFRKAETW TGGADEYRGG SGPVGTCNGN DMKLNPLYQA FIEAGKDAGY PETQDYNGYQ 

       190        200        210        220        230        240 
QEGFGPMHMT VDKGVRASTS NAYLSRAKKR SNFTLMKGVT AHRILLEGKK AVGIEFEQSG 

       250        260        270        280        290        300 
EIKQCFANKE VVSSAGSIGS VQLLQLSGIG PKTVLDKAGI EVKHTLEGVG KNLQDHLEVY 

       310        320        330        340        350        360 
FQYHCKQPIT LNSKLGLISK GLIGTEWILT RKGLGATNHF ESCAFIRSRE GLKSPNIQFH 

       370        380        390        400        410        420 
FLPAAMRYDG RAAFDGHGFQ VHVGPNKPES RGSVEVVSAN PNDKPKIEFN YISTEQDKQD 

       430        440        450        460        470        480 
WRDCIRLTRE ILNQPAMDAF RGEEIQPGLN ITSDEAIGEW VKQNVESAYH PSCSCKMGSN 

       490        500        510        520        530        540 
DDPMAVLNEA CQVRGIEGLR VVDSSIFPTI PNGNLNAPTI MVAERAADMI LGNTLEQSNN 

       550        560 
TPVWIAPNWQ ETQRMRPPKR DLSSISSIA
A7N2P9 in FASTA format

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