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HAMAP: Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus) complete proteome

General information

Species:  Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)
Species code: COLP3
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia (TaxID: 167879) [NEWT/ NCBI]
Description: Colwellia psychrerythraea has been isolated from Arctic marine sediments. Maximum cell yield is achieved at subzero temperature (-1 degree Celsius). Cells continue to swim in sugar solutions down to -10 degrees Celsius and they can grow under deep-sea pressures. It produces cold-active enzymes with low temperature optima for activity and marked heat instability.
Properties: Presence of flagella: Yes
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of COLP3 entries in the UniProt Knowledgebase: 4872 (398 in UniProtKB/Swiss-Prot + 4474 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    34H
Genome structure:
Chromosome EMBL accession number CP000083 (circular; 5,373,180 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] PubMed=16043709; [ NCBI , EBI , Israel , Japan ]
Methe B.A., Nelson K.E., Deming J.W., Momen B., Melamud E., Zhang X., Moult J., Madupu R., Nelson W.C., Dodson R.J., Brinkac L.M., Daugherty S.C., Durkin A.S., DeBoy R.T., Kolonay J.F., Sullivan S.A., Zhou L., Davidsen T.M., Wu M., Huston A.L., Lewis M., Weaver B., Weidman J.F., Khouri H., Utterback T.R., Feldblyum T.V., Fraser C.M. ;
"The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses.";
Proc. Natl. Acad. Sci. U.S.A. 102:10913-10918(2005).
Web links:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Colwellia&GLspecies=psychrerythraea&GLstrain=34H
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid167879%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Cpsy_34H
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p275_Col_psych
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=gcw
 EBI Proteome Analysis page



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