Species code:	CHLPN
Taxonomy:	Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila (TaxID: 83558) [NEWT/ NCBI]
Description:	Obligate intracellular parasite depending on the host machinery for ATP synthesis. Chlamydial life cycle comprehends an intracellular metabolically- active "reticular body" and an inert extracellular spore-like "elementary body" equipped with a unique disulfide-cross-linked protein envelope. Causes acute respiratory diseases in humans, which develop into chronic reactive airway disease, asthma and potentially lung cancer. Infection is also associated with atherosclerosis and coronaropathies.
Properties:	Presence of flagella: No Interaction: Animal pathogen in Mammalia (intracellular obligate) Number of membranes: 2 Number of inteins:0
Statistics:	Number of CHLPN entries in the UniProt Knowledgebase: 1052 (416 in UniProtKB/Swiss-Prot + 636 in UniProtKB/TrEMBL)

Genome structure:	Chromosome EMBL accession number AE001363 (circular; 1,230,230 bp) (download entry) (download Genome Reviews).
Reference(s):	[1] MEDLINE=99206606; PubMed=10192388; [ NCBI , EBI , Israel , Japan ] Kalman S., Mitchell W.P., Marathe R., Lammel C.J., Fan J., Hyman R.W., Olinger L., Grimwood J., Davis R.W., Stephens R.S. ; "Comparative genomes of Chlamydia pneumoniae and C. trachomatis."; Nat. Genet. 21:385-389(1999).
Web links:	CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Chlamydophila&GLspecies=pneumoniae&GLstrain=CWL029 Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=Retrieve&dopt=Overview&list_uids=248 GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Cpne_CWL029 NMPDR: http://www.nmpdr.org/FIG/wiki/rest.cgi/NmpdrPlugin/SeedViewer?pattern=115713.1;page=SearchResult PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p248_Chl_pneum TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntcp01  EBI Proteome Analysis page

Genome structure:	Chromosome EMBL accession number AE002161 (circular; 1,229,853 bp) (download entry) (download Genome Reviews).
Reference(s):	[1] MEDLINE=20150255; PubMed=10684935; [ NCBI , EBI , Israel , Japan ] Read T.D., Brunham R.C., Shen C., Gill S.R., Heidelberg J.F., White O., Hickey E.K., Peterson J.D., Utterback T.R., Berry K.J., Bass S., Linher K.D., Weidman J.F., Khouri H.M., Craven B., Bowman C., Dodson R.J., Gwinn M.L., Nelson W.C., DeBoy R.T., Kolonay J.F., McClarty G., Salzberg S.L., Eisen J.A., Fraser C.M. ; "Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39."; Nucleic Acids Res. 28:1397-1406(2000).
Web links:	CBS (AR39): http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Chlamydophila&GLspecies=pneumoniae&GLstrain=AR39 Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=247 GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Cpne_AR39 NMPDR: http://www.nmpdr.org/FIG/wiki/rest.cgi/NmpdrPlugin/SeedViewer?pattern=115711.7;page=SearchResult PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p247_Chl_pneum TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=bcp  EBI Proteome Analysis page

Genome structure:	Chromosome EMBL accession number BA000008 (circular; 1,226,565 bp) (download entry) (download Genome Reviews).
Reference(s):	[1] MEDLINE=20330349; PubMed=10871362; [ NCBI , EBI , Israel , Japan ] Shirai M., Hirakawa H., Kimoto M., Tabuchi M., Kishi F., Ouchi K., Shiba T., Ishii K., Hattori M., Kuhara S., Nakazawa T. ; "Comparison of whole genome sequences of Chlamydia pneumoniae J138 from Japan and CWL029 from USA."; Nucleic Acids Res. 28:2311-2314(2000).
Web links:	CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Chlamydophila&GLspecies=pneumoniae&GLstrain=J138 Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=Retrieve&dopt=Overview&list_uids=257 GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Cpne_J138 NMPDR: http://www.nmpdr.org/FIG/wiki/rest.cgi/NmpdrPlugin/SeedViewer?pattern=138677.1;page=SearchResult PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p257_Chl_pneum TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntcp02  EBI Proteome Analysis page

Genome structure:	Chromosome EMBL accession number AE009440 (circular; 1,225,935 bp) (download entry) (download Genome Reviews).
Reference(s):	[1] Geng M.M., Schuhmacher A., Muehldorfer I., Bensch K.W., Schaefer K.P., Schneider S., Pohl T., Essig A., Marre R., Melchers K. ; "The genome sequence of Chlamydia pneumoniae TW183 and comparison with other Chlamydia strains based on whole genome sequence analysis."; Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases.
Web links:	CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Chlamydophila&GLspecies=pneumoniae&GLstrain=TW183 Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=Retrieve&dopt=Overview&list_uids=420 GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Cpne_TW183 NMPDR: http://www.nmpdr.org/FIG/wiki/rest.cgi/NmpdrPlugin/SeedViewer?pattern=182082.1;page=SearchResult PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p420_Chl_pneum TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntcp05  EBI Proteome Analysis page

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