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HAMAP: Caulobacter sp. (strain K31) complete proteome

General information

Species:  Caulobacter sp. (strain K31)
Species code: CAUSK
Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter (TaxID: 366602) [NEWT/ NCBI]
Description: Caulobacter sp. (strain K31) was isolated from a low-oxygen groundwater sample and is being sequenced for comparative genome analysis.This organism inhabits aquatic environments and plays an important part in biogeochemical cycling of organic nutrients. It undergoes an unusual developmental cycle in which a swarming motile cell becomes a stalked cell that is attached to a solid surface. The stalked cell then undergoes asymmetric cell division and produces one flagellated motile daughter cell and one stalked daughter cell. The stalked cell immediately undergoes replication and division, while in the swarmer cell these processes are inhibited. Thus, the asymmetric processes in this organism provide useful models for differentiation and development. Differentiation is managed through a control circuit that is comprised of various switches that regulate, through temporal expression, phosphorylation, and targeted proteolysis, the developmental process. This organism also contains a number of energy-dependent transport system, presumably enabling growth in the substrate-sparse aquatic environments that it lives in.
Properties: Presence of flagella: Yes
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of CAUSK entries in the UniProt Knowledgebase: 5373 (232 in UniProtKB/Swiss-Prot + 5141 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    K31
Genome structure:
• Chromosome EMBL accession number CP000927 (circular; 5,477,872 bp) (download entry) (download Genome Reviews).
• Plasmid pCAUL01 EMBL accession number CP000928 (circular; 233,649 bp) (download entry) (download Genome Reviews).
• Plasmid pCAUL02 EMBL accession number CP000929 (circular; 177,878 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Thompson L.S., Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Stephens C., Richardson P. ;
"Complete sequence of chromosome of Caulobacter sp. K31.";
Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases.
[2] Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Thompson L.S., Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Stephens C., Richardson P. ;
"Complete sequence of plasmid1 pCAUL01 of Caulobacter sp. K31.";
Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases.
[3] Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Thompson L.S., Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Stephens C., Richardson P. ;
"Complete sequence of plasmid2 pCAUL02 of Caulobacter sp. K31.";
Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/finished_microbes/cau_k/cau_k.home.html
Other web sites:
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Caul_K31
 EBI Proteome Analysis page



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