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HAMAP: Buchnera aphidicola subsp. Schizaphis graminum complete proteome

General information

Species:  Buchnera aphidicola subsp. Schizaphis graminum
Species code: BUCAP
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Buchnera (TaxID: 98794) [NEWT/ NCBI]
Description: Buchnera species are intracellular bacteria found in association with most aphids. Buchnera are Gram-negative cells and are closely related to the Enterobacteriaceae family. This strain is an endosymbiont of the aphid Schizaphis graminum.
Properties: Presence of flagella: not known
Interaction: Animal endosymbiont in Aphids (obligate endosymbiont)
Number of membranes: not known
Number of inteins:0
Statistics: Number of BUCAP entries in the UniProt Knowledgebase: 562 (562 in UniProtKB/Swiss-Prot + 0 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:   
Genome structure:
• Chromosome EMBL accession number AE013218 (circular; 641,454 bp) (download entry) (download Genome Reviews).
• Plasmid pLeu-Sg EMBL accession number AF041836 (circular; 7,967 bp) (download entry) (download Genome Reviews).
• Plasmid pBsc EMBL accession number Z21938 (linear; 4,753 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] MEDLINE=22084549; PubMed=12089438; [ NCBI , EBI , Israel , Japan ]
Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E. ;
"50 million years of genomic stasis in endosymbiotic bacteria.";
Science 296:2376-2379(2002).
[2] MEDLINE=99091706; PubMed=9873079; [ NCBI , EBI , Israel , Japan ]
Baumann L., Baumann P., Moran N.A., Sandstroem J.P., Thao M.L. ;
"Genetic characterization of plasmids containing genes encoding enzymes of leucine biosynthesis in endosymbionts (Buchnera) of aphids.";
J. Mol. Evol. 48:77-85(1999).
[3] PubMed=8170994; [ NCBI , EBI , Israel , Japan ]
Lai C.-Y., Baumann L., Baumann P. ;
"Amplification of trpEG: adaptation of Buchnera aphidicola to an endosymbiotic association with aphids.";
Proc. Natl. Acad. Sci. U.S.A. 91:3819-3823(1994).
Web links:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Buchnera&GLspecies=aphidicola&GLstrain=Sg
coliBASE: http://xbase.bham.ac.uk/colibase/genome.pl?id=974
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid198804%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Baph_SG
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Buchnera_aphidicola.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p312_Buc_aphid
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntba02
 EBI Proteome Analysis page
 UniProtKB/Swiss-Prot document



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