HAMAP: Acholeplasma laidlawii (strain PG-8A) complete proteome

General information

Species: Acholeplasma laidlawii (strain PG-8A)

Species code:	ACHLI
Taxonomy:	Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma (TaxID: 441768) [NEWT/ NCBI]
Description:	Acholeplasma laidlawii is found in soil, compost, wastewaters, cell cultures as well as in human tissues and in many animal species (birds, bovine, goat, equine, ovine, porcine, feline, rodent, primates). Acholeplasma species are capable of de novo biosynthesis of carotenoids localized exclusively in the cell membrane. Acholeplasma laidlawii is capable of synthesizing glucose using a pyrophosphate-dependent 6-phosphofructokinase which has also been detected in other acholeplasmas. Acholeplasma laidlawii and phytoplasmas are the only mollicutes known to use the universal genetic code, in which UGA is a stop codon.
Properties:	Presence of flagella: No Interaction: No Number of membranes: 1 Number of inteins:0
Statistics:	Number of ACHLI entries in the UniProt Knowledgebase: 1380 (116 in UniProtKB/Swiss-Prot + 1264 in UniProtKB/TrEMBL)

Genome(s) sequenced

Strain: PG-8A

Genome structure:

Chromosome

EMBL accession number CP000896

(circular; 1,496,992 bp)

(download entry)

(download Genome Reviews).

Reference(s):

[1]

Kovaleva G.Y., Kazanov M.D., Malko D.B., Vitreschak A.G., Sernova N.V., Gelfand M.S., Lazarev V.N., Levitskii S.A., Basovskii Y.I., Chukin M.M., Akopian T.A., Vereshchagin V.A., Kostrjukova E.S., Selezneva O.V., Vtyurin N.N., Rogov S.I., Alekseev D.G., Ladygina V.G., Titova G.A., Karpov V.A., Govorun V.M. ;
"Acholeplasma laidlawii complete genome.";
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases.

Web links:

Entrez Genome Project:	http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid441768%5Borgn%5D
GIB (DDBJ):	http://gib.genes.nig.ac.jp/single/index.php?spid=Alai_PG8A

EBI Proteome Analysis page

Tools

Genome Proximity Viewer: This program displays the genes that are found in the genomic environment of a selected locus.
Perform a BLAST search against all proteins from this proteome
Download a file by FTP containing all UniProt Knowledgebase entries of this proteome
- in UniProt Knowledgebase format
- in FASTA format
Retrieve set of characterized or identified proteins for this proteome
Retrieve set of proteins with 3D structure for this proteome