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Entry: PS51257

General information about the entry
Entry namePROKAR_LIPOPROTEIN
Accession numberPS51257
Entry typeMATRIX
DateAUG-2006 (CREATED); AUG-2006 (DATA UPDATE); SEP-2008 (INFO UPDATE).
PROSITE DocumentationPDOC00013
Associated ProRulePRU00303
Name and characterization of the entry
DescriptionProkaryotic membrane lipoprotein lipid attachment site profile.
Matrix / Profile
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=35; TOPOLOGY=LINEAR;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=35;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0; R2=1.0; TEXT='r_units';
/CUT_OFF: LEVEL=0; SCORE=2; N_SCORE=5.0; MODE=1; TEXT='*';
/CUT_OFF: LEVEL=-1; SCORE=1; N_SCORE=1.0; MODE=1; TEXT='*';
/DEFAULT: D=*; I=*; B0=*; B1=*; E0=*; E1=*; MD=0; DM=0; M0=*;

                A   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y
/I:         B0=0; B1=*;
/M:         M=  *,  *,  *,  *,  *,  *,  *,  *,  *,  *,  0,  *,  *,  *,  *,  *,  *,  *,  *,  *;
/M:         M=  0,  0,  0,  0,  0,  0,  0,  0,  1,  0,  0,  0,  0,  0,  1,  0,  0,  0,  0,  0;
/M:         M=  0,  0,  0,  0,  0,  0,  0,  0,  1,  0,  0,  0,  0,  0,  1,  0,  0,  0,  0,  0;
/M:         M=  0,  0,  0,  0,  0,  0,  0,  0,  1,  0,  0,  0,  0,  0,  1,  0,  0,  0,  0,  0;
/M:         M=  0,  0,  0,  0,  0,  0,  0,  0,  1,  0,  0,  0,  0,  0,  1,  0,  0,  0,  0,  0; D=0;
/M:         M=  0,  0,  0,  0,  0,  0,  0,  0,  1,  0,  0,  0,  0,  0,  1,  0,  0,  0,  0,  0; D=0;
/M:         M=  0,  0,  0,  0,  0,  0,  0,  0,  1,  0,  0,  0,  0,  0,  1,  0,  0,  0,  0,  0; D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M: D=0;
/M:         M=  0,  0,  *,  *,  0,  0,  0,  0,  *,  0,  0,  0,  0,  0,  *,  0,  0,  0,  0,  0;
/M:         M=  0,  0,  *,  *,  0,  0,  0,  0,  *,  0,  0,  0,  0,  0,  *,  0,  0,  0,  0,  0;
/M:         M=  0,  0,  *,  *,  0,  0,  0,  0,  *,  0,  0,  0,  0,  0,  *,  0,  0,  0,  0,  0;
/M:         M=  0,  0,  *,  *,  0,  0,  0,  0,  *,  0,  0,  0,  0,  0,  *,  0,  0,  0,  0,  0;
/M:         M=  0,  0,  *,  *,  0,  0,  0,  0,  *,  0,  0,  0,  0,  0,  *,  0,  0,  0,  0,  0;
/M:         M=  0,  0,  *,  *,  0,  0,  0,  0,  *,  0,  0,  0,  0,  0,  *,  0,  0,  0,  0,  0;
/M:         M=  1,  *,  *,  *,  1,  1,  *,  1,  *,  1,  1,  *,  *,  *,  *,  1,  1,  1,  1,  *;
/M:         M=  1,  *,  *,  *,  1,  1,  *,  1,  *,  1,  1,  *,  *,  *,  *,  1,  1,  1,  1,  *;
/M:         M=  1,  1,  *,  *,  1,  1,  *,  1,  *,  1,  1,  *,  *,  1,  *,  1,  1,  1,  *,  1;
/M:         M=  1,  *,  *,  *,  *,  1,  *,  *,  *,  *,  *,  *,  *,  *,  *,  1,  *,  *,  *,  *;
/M:         M=  *,  0,  *,  *,  *,  *,  *,  *,  *,  *,  *,  *,  *,  *,  *,  *,  *,  *,  *,  *;
/I:         E0=0; E1=0;
Numerical results
  • UniProtKB/Swiss-Prot release number: 56.2, total number of sequence entries in that release: 398181.
  • Total number of hits in UniProtKB/Swiss-Prot: 2103 hits in 2103 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 1518 hits in 1518 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 134 hits in 134 different sequences
  • Number of false hits (on unrelated proteins): 451 hits in 451 different sequences
  • Number of known missed hits: 69
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 5
  • Precision (true hits / (true hits + false positives)): 77.09 %
  • Recall (true hits / (true hits + false negatives)): 95.65 %
Comments
  • MATRIX_TYPE: localization_signal
  • Scaling database: UniProtKB/Swiss-Prot: none
  • Matrix author: N_Hulo
  • Taxonomic range: Archaebacteria, Bacteriophages, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
17KD_RICAM  (P50927), 17KD_RICAU  (P50928), 17KD_RICBE  (Q84I68), 
17KD_RICBR  (Q1RGK9), 17KD_RICCN  (P0A3N4), 17KD_RICFE  (Q9F9F2), 
17KD_RICJA  (Q52764), 17KD_RICMO  (P50929), 17KD_RICPA  (P50930), 
17KD_RICPR  (P16624), 17KD_RICRH  (P50931), 17KD_RICRI  (P0A3N5), 
17KD_RICSI  (Q7PA29), 17KD_RICTY  (P22882), 5NTD_TREPA  (O83142), 
5NTD_VIBCH  (Q9KQ30), 5NTD_VIBPA  (P22848), 5NTD_VIBVU  (Q8DFG4), 
ACFD_ECOLI  (Q46837), ACFD_VIBC3  (A5F372), ACFD_VIBCH  (P0C6F0), 
ACRA_ECO57  (P0AE07), ACRA_ECOLI  (P0AE06), ACRE_ECOLI  (P24180), 
ADCA_STRPN  (O05703), ADCA_STRR6  (Q8CWN2), ALGK_AZOVI  (P94202), 
ALGK_PSEAE  (P96956), ALGK_PSEPK  (Q88NC7), ALGK_PSESM  (Q887Q1), 
ALIA_STRPN  (P35592), ALIB_STRPN  (P0A4G0), ALIB_STRR6  (P0A4G1), 
AMIA_STRPN  (P18791), AMID_ECOLI  (P75820), AMSH_ERWAM  (Q46629), 
AMYG_CLOS0  (P29761), ANIA_NEIGO  (Q02219), ANIA_NEIMA  (Q9JTB8), 
ANIA_NEIMB  (Q9JYE1), APBE_CHLMU  (Q9PKW2), APBE_CHLPN  (Q9Z8K2), 
APBE_CHLTR  (O84080), APBE_ECO57  (P0AB86), APBE_ECOLI  (P0AB85), 
APBE_HAEIN  (P44550), APBE_SALTY  (P41780), APBE_TREPA  (O83774), 
APPA_BACSU  (P42061), ARAN_BACHD  (Q9KEE7), ARAN_BACSU  (P94528), 
ARPA_PSEPU  (Q9KJC3), ARPC_PSEPU  (Q9KJC1), ARTP_BACSU  (P54535), 
ATPF_MYCGA  (P33256), ATPF_MYCGE  (P47643), ATPF_MYCPN  (Q50327), 
AURA_CHLAA  (Q8RMH6), BEXD_HAEIN  (P22236), BFPB_ECO11  (Q9S142), 
BFPB_ECO27  (Q47068), BLA1_MORCA  (Q59514), BLA3_BACCE  (P06548), 
BLAC_BACLI  (P00808), BLAC_MYCBO  (P0A5I7), BLAC_MYCTA  (A5U493), 
BLAC_MYCTU  (P0C5C1), BLC_CITFR   (Q46036), BLC_ECO57   (P0A902), 
BLC_ECOLI   (P0A901), BMPB_BORAP  (O31284), BMPB_BORBU  (Q45011), 
BMPB_BORGA  (O31362), BMPC_BORBU  (O50169), BMPD_BORBU  (Q44743), 
BORD_ECOLI  (P77330), BOR_LAMBD   (P26814), CAGT_HELPJ  (Q9ZLU5), 
CAGT_HELPY  (P97245), CDTA_ACTAC  (O87120), CDTA_CAMJE  (Q0PC56), 
CDTA_CAMJJ  (A1VXG4), CDTA_HAEDU  (O06522), CDTA_HELHP  (Q9RFY6), 
CDTC_ECOLX  (Q46670), CHB_VIBHA   (P13670), COML_NEIGO  (Q50985), 
COML_NEIMA  (Q9JVB7), COML_NEIMB  (Q9K0B1), COX2_BACP3  (Q03438), 
COX2_BACPF  (Q04441), COX2_BACSU  (P24011), COX2_CORDI  (Q6NG98), 
COX2_COREF  (Q8FNQ7), COX2_CORGL  (Q8NNK2), CSEA_STRAW  (Q82EB0), 
CSGG_CITK8  (A8AI45), CSGG_ECO57  (P0AEA4), CSGG_ECOL6  (P0AEA3), 
CSGG_ECOLI  (P0AEA2), CSGG_SALTI  (P0A205), CSGG_SALTY  (P0A204), 
CTRA_NEIMA  (P32758), CTRA_NEIMB  (P0A0V8), CTRA_NEIME  (P0A0V9), 
CUSC_ECO57  (Q8XBY3), CUSC_ECOL6  (Q8CWA4), CUSC_ECOLI  (P77211), 
CY551_BACP3 (Q56247), CYCR_RHOGE  (P51758), CYCR_RHOVI  (P07173), 
CYOA_ECOL6  (P0ABJ2), CYOA_ECOLI  (P0ABJ1), CYOA_PSEAE  (Q9I427), 
CYOA_PSEPU  (Q9WWR1), DPPE_BACSU  (P26906), ECNA_CITFR  (P56551), 
ECNA_ECO57  (P0ADB6), ECNA_ECOL6  (P0ADB5), ECNA_ECOLI  (P0ADB4), 
ECNB_CITFR  (P56550), ECNB_ECO57  (P0ADB9), ECNB_ECOL6  (P0ADB8), 
ECNB_ECOLI  (P0ADB7), ECNB_SHIFL  (P0ADC0), EMTA_CITK8  (A8AFS5), 
EMTA_ECO57  (Q8XDJ7), EMTA_ECOK1  (A1AAB6), EMTA_ECOL5  (Q0TII2), 
EMTA_ECOL6  (P59243), EMTA_ECOLC  (B1IU99), EMTA_ECOLI  (P76009), 
EMTA_ECOUT  (Q1RCQ2), EMTA_ENT38  (A4WBE8), EMTA_ENTS8  (A7MKC3), 
EMTA_KLEP7  (A6TAW0), EMTA_SALCH  (Q57NL3), EMTA_SALPA  (Q5PN08), 
EMTA_SALPB  (A9MVX1), EMTA_SALTI  (Q8XGT6), EMTA_SALTY  (Q7CQE4), 
EMTA_SHIBS  (Q31ZN3), EMTA_SHIDS  (Q32H22), EMTA_SHIF8  (Q0T5K7), 
EMTA_SHIFL  (Q83RP9), EMTA_SHISS  (Q3Z2V5), ENVE_SALTY  (Q56030), 
ENVF_SALTY  (Q56032), FATB_VIBAN  (P11460), FEUA_BACSU  (P40409), 
FHUD_BACSU  (P37580), FKBA_NEIMB  (Q9JYI8), FLGH1_CHRVO (Q7NXC0), 
FLGH1_VIBPA (Q9X9J5), FLGH1_YERPE (Q8ZHZ5), FLGH2_BRAJA (Q89F32), 
FLGH2_BURTA (Q2T8V7), FLGH2_CHRVO (Q7NU21), FLGH2_VIBPA (Q87JI3), 
FLGH2_YERPS (Q666C4), FLGH_AGRT5  (Q44342), FLGH_ANADE  (Q2IQP0), 
FLGH_AZOC5  (A8IPJ4), FLGH_AZOSB  (A1K945), FLGH_BORBR  (Q7WJD2), 
FLGH_BORPA  (Q7WA92), FLGH_BORPE  (Q7VYG3), FLGH_BRUA2  (Q2YJ67), 
FLGH_BRUAB  (Q579T6), FLGH_BRUC2  (A9MDR7), FLGH_BRUME  (Q8YB19), 
FLGH_BRUSI  (A9WXL7), FLGH_BRUSU  (Q8FXC2), FLGH_BUCAI  (P57425), 
FLGH_BUCAP  (Q8K9K3), FLGH_BURCA  (Q1BSV1), FLGH_BURCH  (A0KB90), 
FLGH_BURCM  (Q0BB53), FLGH_BURMA  (Q62ES7), FLGH_BURP1  (Q3JX21), 
FLGH_BURS3  (Q39C57), FLGH_BURVG  (A4JIJ2), FLGH_CAMJ8  (A8FLB7), 
FLGH_CAMJD  (A7H4D7), FLGH_CAMJE  (Q9PPM0), FLGH_CAMJJ  (A1VZ42), 
FLGH_CAMJR  (Q5HV94), FLGH_COLP3  (Q485P0), FLGH_DECAR  (Q47I20), 
FLGH_DESDG  (Q30WJ6), FLGH_DESPS  (Q6AJR8), FLGH_DESVH  (Q72EQ4), 
FLGH_DESVV  (A1VG76), FLGH_ECO24  (A7ZKI4), FLGH_ECO57  (P0A6S1), 
FLGH_ECOHS  (A7ZZ37), FLGH_ECOL6  (Q8CW55), FLGH_ECOLI  (P0A6S0), 
FLGH_GEOMG  (Q39YJ8), FLGH_GEOSL  (Q748F4), FLGH_GLUOX  (Q5FRE4), 
FLGH_HAHCH  (Q2SDU4), FLGH_HERAR  (A4G6A8), FLGH_IDILO  (Q5R0P9), 
FLGH_JANSC  (Q28JK4), FLGH_LEGPA  (Q5X5U0), FLGH_LEGPC  (A5IBC0), 
FLGH_LEGPH  (Q5ZW65), FLGH_LEGPL  (Q5WX68), FLGH_MARMM  (Q0AN96), 
FLGH_NITEU  (Q82XG6), FLGH_NITOC  (Q3J8L6), FLGH_NITWN  (Q3STL0), 
FLGH_PELCD  (Q3A5F4), FLGH_PHOLL  (Q7N5M7), FLGH_PSE14  (Q48GC5), 
FLGH_PSEA7  (A6V9B2), FLGH_PSEAB  (Q02IQ0), FLGH_PSEAE  (Q9I4P6), 
FLGH_PSEE4  (Q1I732), FLGH_PSEF5  (Q4KG92), FLGH_PSEHT  (Q3IDW1), 
FLGH_PSEP1  (A5W0G8), FLGH_PSEPF  (Q3KG60), FLGH_PSEPG  (B0KR09), 
FLGH_PSEPK  (Q88ER9), FLGH_PSEPU  (Q52081), FLGH_PSESM  (Q884Z5), 
FLGH_PSEU2  (Q4ZQR6), FLGH_PSEU5  (A4VJD4), FLGH_RALEJ  (Q46PF8), 
FLGH_RALSO  (Q8XSW9), FLGH_RHILO  (Q98HD3), FLGH_RHIME  (Q52950), 
FLGH_RHOPA  (Q6N2Z5), FLGH_RHORT  (Q2RQF3), FLGH_SALCH  (Q57QH8), 
FLGH_SALPA  (Q5PGU6), FLGH_SALTI  (P0A1N9), FLGH_SALTY  (P0A1N8), 
FLGH_SHEAM  (A1S811), FLGH_SHEB8  (A6WQJ8), FLGH_SHEB9  (A9KWR9), 
FLGH_SHEFN  (Q085P5), FLGH_SHEON  (Q8ECA1), FLGH_SHESA  (A0KUU2), 
FLGH_SHESM  (Q0HKS2), FLGH_SHESR  (Q0HX21), FLGH_SHIBS  (Q31ZD4), 
FLGH_SHIDS  (Q32ET9), FLGH_SHIFL  (P0A6S2), FLGH_SHISS  (Q3Z338), 
FLGH_SILPO  (Q5LWX7), FLGH_SINMW  (A6U641), FLGH_SULDN  (Q30SL9), 
FLGH_THICR  (Q31FL3), FLGH_THIDA  (Q3SIE4), FLGH_VIBCH  (Q9KQ13), 
FLGH_VIBF1  (Q5E3N0), FLGH_VIBVU  (Q8DFJ1), FLGH_VIBVY  (Q7MMV1), 
FLGH_WIGBR  (Q8D3F7), FLGH_XANAC  (Q8PL26), FLGH_XANC5  (Q3BU05), 
FLGH_XANC8  (Q4UUH8), FLGH_XANCP  (Q8P9B9), FLGH_XANOM  (Q2P2N8), 
FLGH_XANOR  (Q5GZP1), FUSA_BURCE  (P24126), G1091_BACFN (Q5LGZ0), 
G1091_BACFR (P0C863), G1091_BACV8 (A6KX96), G1094_BACV8 (A6KWM1), 
GERAC_BACSU (P07870), GERBC_BACSU (P39571), GERD_BACSU  (P16450), 
GERXC_BACAN (Q9ZFB3), GFCB_ECOLI  (P75884), GFCD_ECOLI  (P75882), 
GFCE_ECO57  (P0A933), GFCE_ECOLI  (P0A932), GFCE_SHIFL  (P0A934), 
GLAA_SHEWM  (B1KD83), GLAB1_BACV8 (A6KWM0), GLAB_PARD8  (A6LFT2), 
GLDH_FLAJ1  (Q8KRP0), GLDH_GRAFK  (A0M6E0), GLNH_BACST  (P27676), 
GLPQ_HAEIN  (Q06282), GLPQ_TREPA  (O30405), GLUB_COREF  (Q8RQL6), 
GLUB_CORGL  (P48242), GSPD_XANCP  (P29041), GUN1_RALSO  (P58599), 
GUN2_RALSO  (P17974), GUN3_FIBSU  (P14250), H81_NEIGO   (P07211), 
H82_NEIG1   (P11910), H8_NEIMA    (P57025), H8_NEIMB    (P57026), 
H8_NEIMF    (P07212), HBPA_HAEIN  (P33950), HCY_NATPH   (P39442), 
HEL_HAEIN   (P26093), HEXA_PORGI  (P49008), HIFD1_HAEIN (P45992), 
HISJ_CAMJE  (Q46125), HISJ_NEIGO  (Q06758), HPAA1_HELPY (Q48264), 
HPAA2_HELPY (Q48254), HPAA3_HELPY (Q48261), HPAA_HELPJ  (Q9ZL47), 
HPAA_HELPY  (P55969), HRB3_XANEU  (P80152), INVH_SALCH  (P37422), 
INVH_SALTY  (P37423), ISDE_STAA1  (A7X153), ISDE_STAA3  (Q2FHU8), 
ISDE_STAA8  (Q2FZE6), ISDE_STAAB  (Q2YX92), ISDE_STAAC  (Q5HGV1), 
ISDE_STAAE  (A6QG34), ISDE_STAAM  (Q99UX1), ISDE_STAAN  (Q7A652), 
ISDE_STAAR  (Q6GHV3), ISDE_STAAS  (Q6GA82), ISDE_STAAW  (Q7A150), 
LIP1_PSYIM  (Q02104), LIPA_MYCPU  (Q50274), LIPB_MYCPU  (Q9L8P6), 
LIPO_BACSU  (P37966), LLP_BPT5    (Q38162), LOLB_ACTAC  (O52727), 
LOLB_ACTP2  (A3N0D9), LOLB_ACTPJ  (B0BP58), LOLB_AERHH  (A0KN00), 
LOLB_AERS4  (A4SK62), LOLB_ALHEH  (Q0AC01), LOLB_AZOSB  (A1K3G9), 
LOLB_BAUCH  (Q1LTH4), LOLB_CHRSD  (Q1QXC9), LOLB_CHRVO  (Q7NQS7), 
LOLB_CITK8  (A8AG00), LOLB_DECAR  (Q479M4), LOLB_ECO24  (A7ZKY3), 
LOLB_ECO57  (P61321), LOLB_ECOHS  (A7ZZE5), LOLB_ECOL5  (Q0TIG1), 
LOLB_ECOL6  (Q8CW45), LOLB_ECOLC  (B1IU84), LOLB_ECOLI  (P61320), 
LOLB_ENT38  (A4WBC8), LOLB_ERWCT  (Q6D553), LOLB_FRAT1  (Q14JH2), 
LOLB_FRATF  (A7N9I7), LOLB_FRATN  (A0Q491), LOLB_FRATO  (Q0BP05), 
LOLB_FRATT  (Q5NI20), LOLB_FRATW  (A4IZZ3), LOLB_HAEDU  (Q7VL53), 
LOLB_HAEI8  (Q4QL42), LOLB_HAEIE  (A5UCK1), LOLB_HAEIG  (A5UJ22), 
LOLB_HAEIN  (P45270), LOLB_HALHL  (A1WVQ5), LOLB_KLEP7  (A6TAP1), 
LOLB_MANSM  (Q65SB9), LOLB_MARAV  (A1U370), LOLB_MARMS  (A6W1C5), 
LOLB_NEIMA  (P57023), LOLB_NEIMB  (P57024), LOLB_NITEU  (Q82TQ2), 
LOLB_NITOC  (Q3JDR1), LOLB_PASMU  (P57834), LOLB_PHOLL  (Q7N588), 
LOLB_PSE14  (Q48MV7), LOLB_PSEA7  (A6VC64), LOLB_PSEAB  (Q02G06), 
LOLB_PSEAE  (P42812), LOLB_PSEE4  (Q1IEY4), LOLB_PSEF5  (Q4K692), 
LOLB_PSEHT  (Q3IK97), LOLB_PSEMY  (A4XR58), LOLB_PSEP1  (A5VYG2), 
LOLB_PSEPF  (Q3K6W6), LOLB_PSEPG  (B0KND8), LOLB_PSEPK  (Q88PX4), 
LOLB_PSESM  (Q888C4), LOLB_PSEU2  (Q4ZXX0), LOLB_PSEU5  (A4VPC2), 
LOLB_PSYIN  (A1STE0), LOLB_RALEH  (Q0KEP6), LOLB_RALEJ  (Q476F7), 
LOLB_RALME  (Q1LRP9), LOLB_RALSO  (Q8Y2D9), LOLB_SALAR  (A9MP99), 
LOLB_SALCH  (Q57NN3), LOLB_SALPA  (Q5PCR1), LOLB_SALPB  (A9MW01), 
LOLB_SALTI  (Q8Z6A0), LOLB_SALTY  (P30752), LOLB_SERP5  (A8GDA1), 
LOLB_SHEAM  (A1S8R4), LOLB_SHEB5  (A3D0F9), LOLB_SHEB8  (A6WSF2), 
LOLB_SHEB9  (A9L2D6), LOLB_SHEFN  (Q087I6), LOLB_SHEON  (Q8EAR1), 
LOLB_SHEPC  (A4Y3J6), LOLB_SHESA  (A0KT86), LOLB_SHESM  (Q0HFC6), 
LOLB_SHESR  (Q0HYL0), LOLB_SHESW  (A1RNE3), LOLB_SHIBS  (Q31ZQ2), 
LOLB_SHIDS  (Q32GZ8), LOLB_SHIF8  (Q0T5I6), LOLB_SHIFL  (P61322), 
LOLB_SHISS  (Q3Z0S7), LOLB_SODGM  (Q2NRS2), LOLB_THIDA  (Q3SLR7), 
LOLB_VIBCH  (P57070), LOLB_VIBHB  (A7MY80), LOLB_VIBPA  (Q87RN6), 
LOLB_VIBVU  (Q8DFF7), LOLB_VIBVY  (Q7MMY8), LOLB_XANAC  (Q8PNU2), 
LOLB_XANC5  (Q3BX04), LOLB_XANC8  (Q4URB9), LOLB_XANCP  (Q8PC65), 
LOLB_XANOM  (Q2NZW5), LOLB_XANOR  (Q5GWR2), LOLB_YERE8  (A1JRU9), 
LOLB_YERP3  (A7FIG3), LOLB_YERPA  (Q1C856), LOLB_YERPE  (Q8ZEY0), 
LOLB_YERPN  (Q1CJK3), LOLB_YERPP  (A4TJN9), LOLB_YERPS  (Q66AX7), 
LPP1_SALPA  (Q5PH64), LPP1_SALTI  (Q8XFI1), LPP1_SALTY  (Q7CQN4), 
LPP20_HELPJ (P0A0V1), LPP20_HELPY (P0A0V0), LPP2_SALPA  (Q5PH63), 
LPP2_SALTI  (Q8Z6K1), LPP2_SALTY  (Q8ZPP9), LPP3_SALPA  (Q5PH62), 
LPPB_HAEIN  (P44833), LPPB_HAESO  (P36685), LPPK_MYCBO  (P65301), 
LPPK_MYCLE  (Q49803), LPPK_MYCTU  (P65300), LPPL_PSEAE  (P17323), 
LPPN_MYCBO  (Q7VEM3), LPPN_MYCTU  (Q50693), LPPP_MYCBO  (P65303), 
LPPP_MYCTU  (P65302), LPPW_MYCBO  (P65305), LPPW_MYCTU  (P65304), 
LPPX_MYCBO  (P65307), LPPX_MYCLE  (Q9CD80), LPPX_MYCTU  (P65306), 
LPP_ECO57   (P69778), LPP_ECOL6   (P69777), LPP_ECOLI   (P69776), 
LPP_ERWAM   (P02939), LPP_ERWCT   (Q6D622), LPP_MORMO   (P02940), 
LPP_MYCMS   (P55802), LPP_PHOLL   (Q7N3U8), LPP_PROMI   (P09461), 
LPP_SHIFL   (P69780), LPP_YERPE   (Q8ZDZ6), LPP_YERPS   (Q66A25), 
LPQB1_MYCPA (Q73UK8), LPQB2_MYCPA (Q93CB6), LPQB_ACIC1  (A0LVS5), 
LPQB_ARTAT  (A1R848), LPQB_ARTS2  (A0JYG9), LPQB_BIFLO  (Q8G849), 
LPQB_CORDI  (Q6NIS1), LPQB_COREF  (Q8FRJ0), LPQB_CORGB  (A4QC91), 
LPQB_CORGL  (Q8NSC0), LPQB_CORJK  (Q4JTP9), LPQB_LEIXX  (Q6AGI5), 
LPQB_MYCBO  (Q7TWW9), LPQB_MYCBP  (A1KNP6), LPQB_MYCLE  (Q9CCJ0), 
LPQB_MYCS2  (A0QTK4), LPQB_MYCSS  (Q1BCC3), LPQB_MYCTU  (O05889), 
LPQB_MYCUA  (A0PRE9), LPQB_MYCVP  (A1T5X7), LPQB_NOCFA  (Q5YQT1), 
LPQB_PROAC  (Q6A830), LPQB_RHOSR  (Q0S2Y3), LPQB_STRCO  (Q9KYX0), 
LPQB_THEFY  (Q47LZ5), LPQE_MYCBO  (P65309), LPQE_MYCLE  (Q9ZBM7), 
LPQE_MYCTU  (P65308), LPQH_MYCBO  (P0A5J1), LPQH_MYCIT  (P31502), 
LPQH_MYCTU  (P0A5J0), LPQT_MYCBO  (Q7U0V0), LPQT_MYCLE  (Q9CD47), 
LPQT_MYCTU  (P96384), LPQV_MYCBO  (P65311), LPQV_MYCTU  (P65310), 
LPRA_MYCBO  (Q7U094), LPRA_MYCTU  (Q11049), LPRB_MYCBO  (Q7U093), 
LPRB_MYCLE  (Q9CC87), LPRB_MYCTU  (Q11045), LPRE_MYCLE  (Q9CC94), 
LPRG_MYCBO  (P0A5I9), LPRG_MYCLE  (Q9CCP6), LPRG_MYCTU  (P0A5I8), 
LPRH_MYCBO  (P65317), LPRH_MYCTU  (P65316), LPRI_MYCBO  (P65319), 
LPRI_MYCTU  (P65318), LPRP_MYCBO  (P59987), LPRP_MYCTU  (P71548), 
LYS0_ECOLX  (P02987), LYS1_CITFR  (P06962), LYS2_ECOLX  (P06963), 
LYS3_ECOLX  (P05821), LYS3_SHISO  (P21185), LYS4_ECOLX  (P09181), 
LYS5_ECOLX  (P13344), LYS6_ECOLX  (P13345), LYS7_ECOLX  (Q03709), 
LYS8_ECOLX  (P10099), LYS9_ECOLX  (P15176), LYTA_BACSU  (Q02112), 
MAFA1_NEIG1 (Q5F5F6), MAFA1_NEIM0 (A9M2L5), MAFA1_NEIMA (A1IPF8), 
MAFA1_NEIMF (A1KSQ9), MAFA2_NEIG1 (Q5F6H4), MAFA2_NEIM0 (A9M492), 
MAFA2_NEIMA (A1ITU2), MAFA2_NEIMF (A1KVQ6), MAFA3_NEIMF (A1KWH9), 
MAFA_NEIGO  (Q9X6P2), MAFA_NEIMB  (Q9JS44), MALX_STRPN  (P59213), 
MALX_STRR6  (P59214), MAPA_CAMJ8  (A8FM78), MAPA_CAMJE  (P0C633), 
MDTE_ECO57  (Q8X4L0), MDTE_ECOL6  (Q8CVL1), MDTE_ECOLI  (P37636), 
MDTP_ECO57  (Q8X5R9), MDTP_ECOL6  (Q8CVH8), MDTP_ECOLI  (P32714), 
MDTP_SHIFL  (Q83P87), MDTQ_ECO57  (Q8X659), MDTQ_ECOL6  (Q8FFV6), 
MDTQ_ECOLI  (P33369), MDTQ_SHIFL  (Q83KF5), MED_BACSU   (O32436), 
MEPA_PSEPU  (P0C069), MEPC_PSEPU  (P0C071), METQ_ECO57  (Q8X8V9), 
METQ_ECOLI  (P28635), METQ_HAEIN  (P31728), METQ_PASMU  (Q9CK95), 
METQ_SALTI  (Q8Z992), METQ_SALTY  (Q8ZRN1), METQ_VIBCH  (Q9KTJ7), 
METQ_YERPE  (Q8ZH40), MEXA_PSEAE  (P52477), MGLB_TREPA  (Q08255), 
MGRB_ECO24  (A7ZMU8), MGRB_ECO57  (P64513), MGRB_ECOHS  (A8A123), 
MGRB_ECOK1  (P0C7B2), MGRB_ECOL5  (P0C7B3), MGRB_ECOL6  (Q8FGT7), 
MGRB_ECOLC  (B1J0R3), MGRB_ECOLI  (P64512), MGRB_ECOUT  (Q1RAW2), 
MGRB_ENT38  (A4WBI4), MGRB_ENTS8  (A7MNL7), MGRB_SHIBS  (Q321Z1), 
MGRB_SHIDS  (Q32F32), MGRB_SHIF8  (Q0T519), MGRB_SHIFL  (P64514), 
MGRB_SHISS  (Q3Z2G6), MLPA_MYXXA  (P38371), MLTA_ECO57  (P0A936), 
MLTA_ECOLI  (P0A935), MLTA_VIBCH  (Q9KPQ4), MLTB_ECOLI  (P41052), 
MLTC_ACTP2  (A3N339), MLTC_ACTSZ  (A6VLS0), MLTC_CITK8  (A8API2), 
MLTC_ECO24  (A7ZR89), MLTC_ECO57  (Q8XCS6), MLTC_ECOHS  (A8A4A6), 
MLTC_ECOK1  (A1AFE9), MLTC_ECOL5  (Q0TDN8), MLTC_ECOL6  (P0C067), 
MLTC_ECOLC  (B1ISK6), MLTC_ECOLI  (P0C066), MLTC_ECOUT  (Q1R762), 
MLTC_ENT38  (A4WEA0), MLTC_ENTS8  (A7MLX9), MLTC_ERWCT  (Q6D8K0), 
MLTC_HAEDU  (Q7VKB7), MLTC_HAEI8  (Q4QMD8), MLTC_HAEIE  (A5UDW4), 
MLTC_HAEIG  (A5UHR5), MLTC_HAEIN  (P44049), MLTC_HAES1  (Q0I513), 
MLTC_HAES2  (B0UWE6), MLTC_KLEP7  (A6TDX1), MLTC_MANSM  (Q65VT8), 
MLTC_PASMU  (Q9CLB8), MLTC_PHOLL  (Q7N7I2), MLTC_SALAR  (A9MQR3), 
MLTC_SALCH  (Q57K03), MLTC_SALPA  (Q5PMM0), MLTC_SALPB  (A9N4R0), 
MLTC_SALTI  (Q8Z3T9), MLTC_SALTY  (Q8ZM39), MLTC_SERP5  (A8GJ50), 
MLTC_SHIBS  (Q31WM5), MLTC_SHIDS  (Q32C32), MLTC_SHIF8  (Q0T0S4), 
MLTC_SHIFL  (Q83Q83), MLTC_SHISS  (Q3YXF0), MLTC_SODGM  (Q2NRB3), 
MLTC_YERE8  (A1JPV7), MLTC_YERP3  (A7FEX3), MLTC_YERPA  (Q1CB94), 
MLTC_YERPE  (Q8ZHE6), MLTC_YERPN  (Q1CEV1), MLTC_YERPP  (A4TI58), 
MLTC_YERPS  (Q666M2), MLTD_ECOL6  (P0AEZ8), MLTD_ECOLI  (P0AEZ7), 
MNTA_BACHD  (Q9KFG3), MNTA_BACSU  (O34385), MNTA_LISIN  (Q92AG1), 
MNTA_LISMO  (Q8Y653), MODA_MYCBO  (P0A5Y1), MODA_MYCTU  (P0A5Y0), 
MP17_FRATH  (P18149), MP83_MYCBO  (P0A671), MP83_MYCTU  (P0A670), 
MSME_STRMU  (Q00749), MTRC_NEIGO  (P43505), MTSA1_STRPN (P0A4G2), 
MTSA2_STRPN (P42363), MTSA_LACLA  (Q9CFZ5), MTSA_STRAP  (Q9L5X1), 
MTSA_STRCR  (Q53891), MTSA_STRGN  (P42364), MTSA_STRMT  (Q9L5X0), 
MTSA_STRMU  (Q9KIJ3), MTSA_STROR  (Q9L5W9), MTSA_STRP1  (P0A4G4), 
MTSA_STRP3  (P0A4G5), MTSA_STRP6  (Q5XDI6), MTSA_STRP8  (Q8P280), 
MTSA_STRPA  (P31305), MTSA_STRR6  (P0A4G3), MTSA_STRSA  (P31304), 
MXIJ_SHIFL  (Q06081), MXIJ_SHISO  (Q55288), MXIM_SHIFL  (P0A1X2), 
MXIM_SHISO  (P0A1X3), NISI_LACLA  (P42708), NLPA_ECO57  (Q8XC50), 
NLPA_ECOLI  (P04846), NLPB_ECOLI  (P0A903), NLPB_SHIFL  (P0A904), 
NLPC_ECOLI  (P23898), NLPC_HAEIN  (P45296), NLPD_ECOLI  (P0ADA3), 
NLPD_SALDU  (P39700), NLPD_SALTI  (Q56131), NLPD_SALTY  (P40827), 
NLPD_SHIFL  (P0ADA4), NLPE_ECOLI  (P40710), NLPI_ECO57  (P0AFB3), 
NLPI_ECOL6  (P0AFB2), NLPI_ECOLI  (P0AFB1), NLPI_HAEIN  (P44585), 
NLPI_SHIFL  (P0AFB4), NODT_RHILT  (P24145), NODT_RHILV  (P15727), 
OMCAL_CHLTR (P18585), OMCA_CHLMU  (Q9PJU9), OMCA_CHLPN  (Q9Z7Z5), 
OMCA_CHLPS  (P27606), OMCA_CHLTR  (P21355), OMLA_ACTPL  (Q02937), 
OMLA_PSEAE  (O68562), OMLA_PSEFL  (O68564), OMP10_AGRT5 (Q8U9F9), 
OMP10_BRUAB (P0A3P0), OMP10_BRUME (P0A3N8), OMP10_BRUSU (P0A3N9), 
OMP10_RHILO (Q98H63), OMP10_RHIME (Q92M53), OMP16_AGRT5 (Q8U9L5), 
OMP16_BRUAB (P0A3S9), OMP16_BRUME (P0A3S7), OMP16_BRUSU (P0A3S8), 
OMP16_RHILO (Q98F85), OMP16_RHIME (Q926C3), OMP19_AGRT5 (Q8UC57), 
OMP19_BRUA2 (Q2YLR6), OMP19_BRUAB (P0C109), OMP19_BRUME (P0A3P1), 
OMP19_BRUSU (P0A3P2), OMP19_RHILO (Q98EC1), OMP19_RHIME (Q926C0), 
OPPA1_LACLA (Q9CEK0), OPPA2_LACLA (Q07741), OPPA_BACSU  (P24141), 
OPPA_LACLS  (Q02VA9), OPRI_PSEAE  (P11221), OPRJ_PSEAE  (Q51397), 
OPRM_PSEAE  (Q51487), OPUAC_BACSU (P46922), OPUBC_BACSU (Q45462), 
OPUCC_BACSU (O32243), OSMB_ECO57  (P0ADA9), OSMB_ECOL6  (P0ADA8), 
OSMB_ECOLI  (P0ADA7), OSMB_SALTY  (P37723), OSMB_SHIFL  (P0ADB0), 
OSME_ECO57  (P0ADB2), OSME_ECOLI  (P0ADB1), OSME_SHIFL  (P0ADB3), 
OSPA1_BORBU (P14013), OSPA2_BORBU (Q09087), OSPA3_BORBU (Q09086), 
OSPA4_BORBU (Q04851), OSPA5_BORBU (Q09089), OSPA6_BORBU (P0A3N6), 
OSPA7_BORBU (Q04968), OSPA_BORAF  (P0A3N7), OSPB1_BORBU (P17739), 
OSPB2_BORBU (Q09090), OSPC1_BORBU (Q07337), OSPC2_BORBU (Q08137), 
OUTS_DICD3  (Q01567), OXAA1_BACAN (Q81JH1), OXAA1_BACCR (Q814F4), 
OXAA1_BACHD (Q9RCA5), OXAA1_BACSU (Q01625), OXAA1_LACLA (Q9CJ72), 
OXAA1_LACPL (Q88RX1), OXAA1_LISIN (Q926Q5), OXAA1_LISMF (Q71VQ8), 
OXAA1_LISMO (Q8Y3I2), OXAA1_STAEQ (Q5HLG6), OXAA1_STAES (Q8CMK4), 
OXAA1_STRA3 (Q8E6W4), OXAA1_STRA5 (Q8CX16), OXAA1_STRMU (Q8DVX3), 
OXAA1_STRP1 (P65631), OXAA1_STRP3 (P65632), OXAA1_STRP6 (Q5XDY9), 
OXAA1_STRP8 (Q8P2P8), OXAA1_STRPN (Q97NI6), OXAA1_STRR6 (Q8DN93), 
OXAA2_BACAN (Q81XH4), OXAA2_BACCR (Q815V9), OXAA2_BACHD (Q9KDP2), 
OXAA2_LACLA (Q9CHZ9), OXAA2_LACPL (Q88WR8), OXAA2_LISIN (Q92BX6), 
OXAA2_LISMF (Q71ZU1), OXAA2_LISMO (Q8Y7A9), OXAA2_STAEQ (Q5HMD1), 
OXAA2_STAES (Q8CMK8), OXAA2_STRA3 (Q8E3U9), OXAA2_STRA5 (Q8DY84), 
OXAA2_STRMU (Q8DSP8), OXAA2_STRP1 (Q9A1C3), OXAA2_STRP3 (Q8K8J2), 
OXAA2_STRP6 (Q5XDQ5), OXAA2_STRP8 (Q8P2D8), OXAA2_STRPN (Q97NP5), 
OXAA2_STRR6 (Q8DNE1), OXAA_BACPF  (O87567), OXAA_ENTFA  (Q82YV1), 
OXAA_OCEIH  (Q8EKU1), OXAA_PEDPA  (Q03D58), OXAA_STAA1  (A7X4S6), 
OXAA_STAA2  (A6U3H6), OXAA_STAA3  (Q2FF36), OXAA_STAA8  (Q2FWG4), 
OXAA_STAA9  (A5IUN6), OXAA_STAAB  (Q2YUI9), OXAA_STAAC  (Q5HEA9), 
OXAA_STAAE  (A6QIT4), OXAA_STAAM  (P65628), OXAA_STAAN  (P65629), 
OXAA_STAAR  (Q6GEY5), OXAA_STAAS  (Q6G7M0), OXAA_STAAW  (P65630), 
OXAA_STACA  (Q9RGS4), OXAA_STAHJ  (Q4L7X2), OXAA_STAS1  (Q49Z38), 
OXAA_STRS2  (A4W485), P22_BORBU   (Q05903), P33_MYCPE   (Q50368), 
P35_MYCPE   (Q50367), P37_MYCGE   (Q49410), P37_MYCHR   (P15363), 
P37_MYCPN   (P75371), P46_MYCH2   (P0C0J7), P46_MYCHJ   (P0C0J8), 
P72_MYCMS   (P55801), PAL_BUCBP   (Q89AJ5), PAL_ECO57   (P0A913), 
PAL_ECOLI   (P0A912), PAL_HAEIN   (P10324), PAL_LEGPN   (P26493), 
PAL_PASMU   (Q51886), PAL_PSEAE   (Q9I4Z4), PAL_PSEPK   (P0A138), 
PAL_PSEPU   (P0A139), PAL_SHIFL   (P0A914), PCP_HAEIN   (P10325), 
PCP_YEREN   (P31484), PGAB_ECO57  (Q8XAR3), PGAB_ECOLI  (P75906), 
PLPA_PASHA  (Q08868), PLPB_PASHA  (Q08869), PLPC_PASHA  (Q08870), 
PRGK_SALTY  (P41786), PRSA1_BACAN (Q81U45), PRSA1_BACCR (Q81GY5), 
PRSA1_LACJO (P60750), PRSA1_LACPL (Q88X05), PRSA1_LISIN (Q92BR2), 
PRSA1_LISMF (Q71ZM6), PRSA1_LISMO (Q8Y759), PRSA1_STRP1 (P60811), 
PRSA1_STRP3 (P60751), PRSA1_STRP6 (Q5XBH0), PRSA1_STRP8 (Q8P0E5), 
PRSA2_BACAN (Q81TU1), PRSA2_BACCR (Q81GN0), PRSA2_LACJO (P60810), 
PRSA2_LACPL (Q88T16), PRSA2_LISIN (Q929F4), PRSA2_LISMF (Q71XE6), 
PRSA2_LISMO (Q8Y557), PRSA2_STRP1 (P60812), PRSA2_STRP3 (Q8K5P3), 
PRSA2_STRP6 (Q5X9P6), PRSA2_STRP8 (P60813), PRSA3_BACAN (Q81QT1), 
PRSA3_BACCR (Q81DT1), PRSA4_BACCR (Q81CB1), PRSA_BACHD  (Q9KDN4), 
PRSA_BACSU  (P24327), PRSA_CLOAB  (Q97E99), PRSA_CLOBL  (A7GJD2), 
PRSA_CLOK5  (A5N4J2), PRSA_CLOP1  (Q0TMG9), PRSA_CLOPE  (Q8XHK0), 
PRSA_CLOPS  (Q0SQ68), PRSA_CLOTE  (Q899I2), PRSA_ENTFA  (Q837Y9), 
PRSA_LACBA  (Q03QE1), PRSA_LACLA  (Q9CEV9), PRSA_LACLC  (P0C2B5), 
PRSA_LACLS  (Q02VE3), PRSA_LACPA  (Q02473), PRSA_OCEIH  (Q8CXK4), 
PRSA_PEDPA  (Q03GD4), PRSA_STAA1  (A7X3U8), PRSA_STAA2  (A6U2U4), 
PRSA_STAA3  (Q2FFQ5), PRSA_STAA8  (Q2G2S6), PRSA_STAAB  (Q2YTZ6), 
PRSA_STAAC  (Q5HET4), PRSA_STAAE  (A6QI23), PRSA_STAAM  (P60747), 
PRSA_STAAN  (P60748), PRSA_STAAR  (Q6GFL5), PRSA_STAAS  (Q6G894), 
PRSA_STAAT  (A8YY10), PRSA_STAAW  (P60749), PRSA_STAEQ  (Q5HN96), 
PRSA_STAES  (Q8CNR4), PRSA_STRA1  (Q3K1P9), PRSA_STRA3  (Q8E602), 
PRSA_STRA5  (Q8E0C6), PRSA_STRGC  (A8AYJ0), PRSA_STRMU  (Q8CVC6), 
PRSA_STRP2  (Q04KU8), PRSA_STRPN  (Q97R51), PRSA_STRR6  (Q8DQ24), 
PRSA_STRSV  (A3CLY1), PRSA_THETN  (Q8R760), PSTS1_MYCTU (P15712), 
PSTS1_STRA3 (Q8E5K2), PSTS1_STRA5 (Q8DZV4), PSTS1_STRPN (Q97Q31), 
PSTS1_STRR6 (Q8DPB1), PSTS2_MYCTU (O05870), PSTS2_STRA3 (Q8E310), 
PSTS2_STRA5 (Q8CVC9), PSTS2_STRPN (P0C2M5), PSTS2_STRR6 (Q8DN64), 
PSTS3_MYCAV (Q9KK89), PSTS3_MYCBO (P0A5Y3), PSTS3_MYCLE (Q9CBE5), 
PSTS3_MYCTU (P0A5Y2), PSTS_BACSU  (P46338), PSTS_STAA3  (Q2FH48), 
PSTS_STAA8  (Q2FYP6), PSTS_STAAB  (Q2YXX9), PSTS_STAAC  (Q5HG31), 
PSTS_STAAM  (Q7A2S1), PSTS_STAAN  (Q7A5Q2), PSTS_STAAR  (Q6GH18), 
PSTS_STAAS  (Q6G9H1), PSTS_STAAW  (Q7A0X7), PSTS_STAEQ  (Q5HPF2), 
PSTS_STAES  (Q8CP98), PSTS_STAHJ  (Q4L694), PSTS_STAS1  (Q49XJ1), 
PSTS_XYLFA  (Q9PBK3), PSTS_XYLFT  (Q87C91), PULA_KLEAE  (P07811), 
PULA_KLEPN  (P07206), PULS_KLEPN  (P20440), QOX2_ACEAC  (P50653), 
QOX2_BACSU  (P34957), QOX2_STAA3  (Q2FI17), QOX2_STAA8  (Q2FZJ9), 
QOX2_STAAB  (Q2YX14), QOX2_STAAC  (Q5HH23), QOX2_STAAM  (Q99V36), 
QOX2_STAAN  (Q7A698), QOX2_STAAR  (Q6GI23), QOX2_STAAS  (Q6GAF2), 
QOX2_STAAW  (Q7A181), QOX2_STAEQ  (Q5HQA9), QOX2_STAES  (Q8CPP6), 
QOX2_STAHJ  (Q4L565), QOX2_STAS1  (Q49WI4), RBSB_BACSU  (P36949), 
RLPA_AQUAE  (O67235), RLPA_CAMJE  (Q9PHM1), RLPA_ECO57  (Q8XBQ1), 
RLPA_ECOLI  (P10100), RLPA_HELPJ  (Q9ZJ38), RLPA_HELPY  (O26091), 
RLPA_PSEAE  (Q9X6V6), RLPA_RICBR  (Q1RJR1), RLPA_SALTI  (Q8Z8I0), 
RLPA_SALTY  (Q8ZR01), RLPA_VIBCH  (Q9KTF4), RLPA_YERPE  (Q8ZDG6), 
RLPB_ECO24  (A7ZJ30), RLPB_ECO57  (Q8XBN9), RLPB_ECOHS  (A7ZXR7), 
RLPB_ECOK1  (A1A8R6), RLPB_ECOL5  (Q0TK32), RLPB_ECOL6  (P0ADC2), 
RLPB_ECOLC  (B1IYG7), RLPB_ECOLI  (P0ADC1), RLPB_ECOUT  (Q1RES0), 
RLPB_ERWCT  (Q6D7L7), RLPB_PHOLL  (Q7N756), RLPB_SALCH  (Q57RS8), 
RLPB_SALPA  (Q5PM87), RLPB_SALTI  (Q8Z8H6), RLPB_SALTY  (Q8ZQZ7), 
RLPB_SERP5  (A8GB20), RLPB_SHIBS  (Q324Q3), RLPB_SHIDS  (Q32IU0), 
RLPB_SHIF8  (Q0T6Q1), RLPB_SHIFL  (Q83LX4), RLPB_SHISS  (Q3Z4F1), 
RLPB_SODGM  (Q2NUU8), RLPB_YERE8  (A1JQ26), RLPB_YERP3  (A7FKW1), 
RLPB_YERPA  (Q1C520), RLPB_YERPE  (Q7CJV2), RLPB_YERPN  (Q1CKQ5), 
RLPB_YERPP  (A4TNZ8), RLPB_YERPS  (Q66DE4), RZ1_BP933   (Q9XJJ7), 
RZ1_LAMBD   (Q37935), RZOD_ECOLI  (P58041), RZOR_ECOLI  (P58042), 
SARA_STRGC  (P31306), SEPA_PSEP1  (Q849Q9), SEPC_PSEP1  (Q849R1), 
SILC_SALTY  (Q9ZHD2), SLP_BACSU   (P39910), SLP_ECOLI   (P37194), 
SLYB_ECO57  (P0A906), SLYB_ECOLI  (P0A905), SLYB_SALTI  (P0A1X1), 
SLYB_SALTY  (P0A1X0), SLYB_SHIFL  (P0A907), SMPA_ECOL6  (P0A938), 
SMPA_ECOLI  (P0A937), SMPA_HAEIN  (P44057), SMPA_SHIFL  (P0A939), 
SMPA_TREHY  (Q54313), SMPA_VIBC3  (A5F378), SMPA_VIBCH  (P0C6Q9), 
SODC_DEIRA  (Q9RU48), SODC_MYCBO  (P0A609), SODC_MYCLE  (Q9CBI6), 
SODC_MYCPA  (Q9AGW2), SODC_MYCTU  (P0A608), SPR_ECO57   (P0AFV6), 
SPR_ECOL6   (P0AFV5), SPR_ECOLI   (P0AFV4), SPR_SHIFL   (P0AFV7), 
SRPA_PSEPU  (O31099), SRPC_PSEPU  (O31101), SSAJ_SALTY  (P74852), 
SSUA_BACSU  (P40400), TA15_TREPA  (P16055), TA34_TREPA  (P19478), 
TA47_TREPA  (P29723), TA53_TREDE  (P18164), TAGA_VIBC3  (A5F398), 
TAGA_VIBCH  (P0C6Q7), TBPB_HAEIN  (P44971), TCPC_VIBCH  (P29481), 
TCSA_LISIN  (Q92BW7), TCSA_LISMO  (Q48754), TCYA_BACSU  (P42199), 
TCYJ_BACSU  (O34406), TCYK_BACSU  (O34852), THIX_CORGL  (P42461), 
TMPA_TREPH  (P29721), TMPC_TREPA  (P29724), TPN32_TREPA (O07950), 
TRAK1_ECOLI (P41066), TRAK2_ECOLX (Q46999), TRAT1_ECOLI (P13979), 
TRAT2_ECOLX (P32885), TRAT3_ECOLX (P13980), TRAT4_ECOLX (P15177), 
TRAT_SALTY  (P22107), TRAV_ECOLI  (P41069), TRBH_AGRTU  (P54916), 
TRBH_RHISN  (P55405), TTGA_PSEPK  (Q88N30), TTGA_PSEPU  (Q9WWZ9), 
TTGC_PSEPK  (Q88N32), TTGC_PSEPU  (Q9WWZ8), TTGD_PSEPU  (Q9KWV5), 
TTGF_PSEPU  (Q9KWV3), TTGG_PSEPU  (Q93PU5), TTGI_PSEPU  (Q93PU3), 
U409_NEIMB  (Q9K1P6), U409_STAA3  (Q2FJS0), U409_STAA8  (Q2G131), 
U409_STAAB  (Q2YVG5), U409_STAAC  (Q5HIV1), U409_STAAM  (Q99WN4), 
U409_STAAN  (Q7A7M3), U409_STAAR  (Q6GJX5), U409_STAAS  (Q6GCC9), 
U409_STAAW  (Q8NYA3), U409_STAHJ  (Q4L8N2), VACJ_ECOLI  (P76506), 
VACJ_HAEIN  (P44042), VACJ_SHIFL  (P43262), VEXA_SALTI  (Q04976), 
VIRB7_AGRT5 (P17797), VIRB7_AGRT9 (P0A3W5), VIRB7_AGRTU (P0A3W4), 
VIRB7_BRUA2 (Q2YJ77), VIRB7_BRUAB (P0C535), VIRB7_BRUME (P0C537), 
VIRB7_BRUO2 (P0C538), VIRB7_BRUSU (Q7CEG2), VLP10_BORHE (P70900), 
VLP12_BORHE (P70901), VLP14_BORHE (P70905), VLP15_BORHE (P70902), 
VLP17_BORHE (P32777), VLP18_BORHE (P70906), VLP19_BORHE (P70903), 
VLP21_BORHE (P21875), VLP23_BORHE (P70904), VLP25_BORHE (P32779), 
VLP4_BORHE  (P70897), VLP5_BORHE  (P70898), VLP7_BORHE  (P21876), 
VLP9_BORHE  (P70899), VLPA_MYCHR  (P29228), VLPB_MYCHR  (P29229), 
VLPC_MYCHR  (P29230), VLPD_MYCHR  (Q49536), VLPE_MYCHR  (Q49537), 
VLPF_MYCHR  (Q49538), VSP11_BORHE (Q45206), VSP13_BORHE (Q45207), 
VSP1_BORHE  (Q45208), VSP22_BORHE (Q45209), VSP24_BORHE (P32778), 
VSP2_BORHE  (Q45212), VSP3_BORHE  (Q02448), VSP6_BORHE  (Q45214), 
VSP8_BORHE  (Q45215), WZA_ECO57   (P0A931), WZA_ECOLI   (P0A930), 
WZA_SALTI   (Q8Z5G4), WZA_SALTY   (Q8ZNQ9), XP55_STRLI  (P06109), 
Y011_MYCPN  (P75102), Y028_RICTY  (Q68XX6), Y040_MYCGE  (P47286), 
Y040_STAAB  (Q2YUT0), Y045_MYCGE  (P47291), Y051_RICPR  (Q9ZE94), 
Y052_MYCPN  (P75062), Y052_STAA8  (Q2G1Q1), Y053_STAA8  (Q2G1Q0), 
Y054_MYCPN  (P75060), Y054_STAA8  (Q2G1P9), Y055_STAA8  (Q2G1P8), 
Y058_MYCPN  (P75056), Y067_MYCGE  (P47313), Y068_MYCGE  (P47314), 
Y071_STAAW  (Q8NYU2), Y072_STAAS  (Q6GD27), Y072_STAAW  (Q8NYU1), 
Y073_STAAS  (Q6GD26), Y073_STAAW  (Q8NYU0), Y074_STAAS  (Q6GD25), 
Y077_RICCN  (Q92JJ0), Y079_STAAC  (Q5HJS3), Y080_RICTY  (Q68XS6), 
Y080_STAAC  (Q5HJS2), Y081_STAAC  (Q5HJS0), Y083_MYCPN  (P75610), 
Y083_STAAC  (Q5HJR9), Y085_METJA  (Q57550), Y092_STAAN  (Q7A887), 
Y093_RICFE  (Q4UNB4), Y093_STAAN  (Q7A886), Y094_STAAN  (Q7A885), 
Y095_MYCGE  (P47341), Y095_STAAN  (Q7A884), Y096_STAAM  (Q99XB6), 
Y096_STAAN  (Q7A883), Y097_MYCPN  (P75595), Y097_STAAM  (Q99XB5), 
Y098_STAAM  (Q99XB4), Y099_STAAM  (Q99XB3), Y100_STAA3  (Q2FKG1), 
Y100_STAAM  (Q99XB2), Y101_STAA3  (Q2FKG0), Y102_STAA3  (Q2FKF9), 
Y1039_PYRHO (O58758), Y103_STAA3  (Q2FKF8), Y106_STAAR  (Q6GKK2), 
Y107_CHLMU  (Q9PLJ2), Y108_RICPR  (Q9ZE40), Y1124_NEIMB (Q7DDE8), 
Y1126_NEIMB (Q7DDH4), Y1174_SYNP6 (P08452), Y1176_PASMU (Q9CLP1), 
Y1214_PYRHO (O58969), Y1261_RICBR (Q1RH22), Y1262_AQUAE (O67301), 
Y128_RICFE  (Q4UN79), Y1314_HAEIN (Q57223), Y133_MYCPN  (P75265), 
Y142_STAES  (Q8CU21), Y144_STAES  (Q8CU19), Y145_STAES  (Q8CU18), 
Y146_RICCN  (Q92JC1), Y149_MYCGE  (P47395), Y1509_PASMU (Q9CKU6), 
Y152_MYCPN  (P75034), Y1543_RHILO (Q98KC1), Y162_HAEIN  (P43782), 
Y162_MYCPN  (P75583), Y1695_PYRFU (Q8U0A4), Y1714_PYRHO (O59403), 
Y1720_PASMU (Q9CKA5), Y1756_XYLFT (Q87AR6), Y177_HAEIN  (P44553), 
Y1806_AQUAE (O67672), Y183_RICPR  (Q9ZDY1), Y185_MYCGE  (P47431), 
Y186_MYCGE  (P47432), Y186_STAES  (Q8CTZ0), Y1897_PASMU (Q9CJU4), 
Y1947_STAES (Q8CN89), Y1959_STAEQ (Q5HLM6), Y1984_CAUCR (Q9A6U9), 
Y199_MYCPN  (Q50289), Y200_MYCPN  (Q50288), Y207_LISMO  (P33385), 
Y2102_LEIXX (Q6ACU3), Y2158_STAAN (Q7A3W5), Y217_HELPJ  (Q9ZMK2), 
Y2248_STAAB (Q2YZ16), Y2259_STAAS (Q6G6V2), Y2273_STAAN (Q7A3L3), 
Y2275_STAAN (Q7A3L1), Y2278_STRCO (Q9RKQ0), Y2289_STAAW (Q8NV41), 
Y2315_STAA3 (Q2FEC8), Y231_MYCCT  (P45615), Y232_HELPY  (O25018), 
Y233_MYCPN  (P75538), Y235_HELPH  (Q1CUS0), Y2365_STAAC (Q5HDI7), 
Y2368_STAAM (Q99RQ9), Y2373_STAAS (Q6G6I8), Y2375_STAAS (Q6G6I6), 
Y239_LISIN  (Q92F67), Y2406_STAAW (Q8NUV8), Y2408_STAAW (Q8NUV6), 
Y2422_STAEQ (Q5HKC6), Y2423_STAEQ (Q5HKC5), Y2428_STAA3 (Q2FE15), 
Y2430_STAA3 (Q2FE14), Y2443_STAEQ (Q5HKA6), Y2445_STAEQ (Q5HKA4), 
Y2447_STAEQ (Q5HKA2), Y2451_STAEQ (Q5HK99), Y2453_STAEQ (Q5HK97), 
Y2457_STAAR (Q6GE63), Y2465_STAEQ (Q5HK85), Y2485_STAAM (Q99RE8), 
Y2487_STAAM (Q99RE6), Y248_TREPA  (O83276), Y2497_STAAC (Q5HD65), 
Y2498_STAAC (Q5HD64), Y2573_STAAR (Q6GDV2), Y2585_MYCTU (Q50636), 
Y260_MYCGE  (P47502), Y260_TREPA  (O83284), Y2616_MYCBO (P59984), 
Y2650_STAA8 (Q2FVQ2), Y271_MYCPN  (P75505), Y2725_STRCO (Q53936), 
Y2788_STAA8 (Q2FVC5), Y2789_STAA8 (Q2FVC4), Y2810_BORBU (P70837), 
Y2815_BORBU (P70841), Y281_MYCPN  (P75496), Y284_MYCPN  (P75493), 
Y288_MYCPN  (P75489), Y3020_BORBU (O51025), Y307_MYCGE  (P47549), 
Y309_HELAH  (Q17YX5), Y309_MYCGE  (P47551), Y321_MYCGE  (P47563), 
Y338_CHLMU  (Q9PKX2), Y338_MYCGE  (P47580), Y347_CAMJ8  (A8FKF9), 
Y348_MYCGE  (P47590), Y349_CHLPN  (Q9Z8J4), Y363_MYCPN  (P75418), 
Y369_MYCPN  (P75412), Y371_CAMJE  (Q9PID1), Y389_STAAB  (Q2YVR1), 
Y390_STAAB  (Q2YVR0), Y392_STAAB  (Q2YVQ8), Y393_STAAB  (Q2YVQ7), 
Y394_STAAB  (Q2YVQ6), Y395_CAMJJ  (A1VY92), Y395_MYCGE  (P47635), 
Y395_STAAB  (Q2YVQ5), Y396_STAAB  (Q2YVQ4), Y396_STAAN  (Q7A7G6), 
Y397_STAAN  (Q7A7G5), Y397_STAAW  (Q8NY39), Y398_STAAN  (Q7A7G4), 
Y398_STAAW  (Q8NY38), Y399_RICTY  (Q68WW6), Y399_STAAN  (Q7A7G3), 
Y399_STAAS  (Q6GC48), Y399_STAAW  (Q8NY37), Y400_STAAN  (Q99WG2), 
Y400_STAAS  (Q6GC47), Y400_STAAW  (Q8NY36), Y401_STAAN  (Q7A7G2), 
Y401_STAAS  (Q6GC46), Y401_STAAW  (Q8NY35), Y402_STAA8  (Q2G0X1), 
Y402_STAAN  (Q7A7G1), Y402_STAAS  (Q6GC45), Y403_STAAN  (Q7A7G0), 
Y403_STAAS  (Q6GC44), Y404_STAA8  (Q2G0X0), Y404_STAAN  (Q7A7F9), 
Y405_STAA8  (Q2G0W9), Y405_STAAN  (Q7A7F8), Y408_MYCPN  (P75376), 
Y410_STAA3  (Q2FJK4), Y411_MYCPN  (P75373), Y411_STAA3  (Q2FJK3), 
Y412_MYCGE  (P47652), Y413_RICPR  (Q9ZDB9), Y413_STAA3  (Q2FJK2), 
Y414_STAA3  (Q2FJK1), Y415_STAA3  (Q2FJK0), Y416_STAA3  (Q2FJJ9), 
Y417_STAA3  (Q2FJJ8), Y418_STAA3  (Q2FJJ7), Y419_STAA3  (Q2FJJ6), 
Y420_CAMJR  (Q5HW96), Y4299_PSEAE (Q9HWA1), Y436_MYCPN  (P75342), 
Y436_STAAM  (Q99WG6), Y437_STAAM  (Q99WG5), Y438_STAAM  (Q99WG4), 
Y438_STAAR  (Q6GJN3), Y439_MYCGE  (P47677), Y439_MYCPN  (P75339), 
Y439_STAAM  (Q99WG3), Y439_STAAR  (Q6GJN2), Y440_MYCGE  (P47678), 
Y440_STAAM  (Q932G7), Y441_STAAM  (Q99WG1), Y442_MYCPN  (P75336), 
Y442_STAAM  (Q99WG0), Y442_STAAR  (Q6GJN1), Y443_STAAM  (Q99WF9), 
Y443_STAAR  (Q6GJN0), Y444_MYCPN  (P75334), Y444_STAAM  (Q99WF8), 
Y444_STAAR  (Q6GJM9), Y445_STAAM  (Q99WF7), Y445_STAAR  (Q6GJM8), 
Y449_TREPA  (O83463), Y452_PYRAB  (Q9V1H5), Y456_MYCPN  (P75327), 
Y456_TREPA  (O83469), Y459_MYCPN  (P75324), Y462_TREPA  (O83475), 
Y4650_STRCO (P41108), Y4651_STRCO (P41109), Y467_MYCPN  (P75316), 
Y470_HAEDU  (Q9L7A6), Y481_STAAC  (Q5HIN6), Y482_STAAC  (Q5HIN5), 
Y483_STAAC  (Q5HIN4), Y484_STAAC  (Q5HIN3), Y486_STAAC  (Q5HIN1), 
Y489_MYCLE  (Q49646), Y489_MYCPN  (P75296), Y4EE_RHISN  (P55428), 
Y4SI_RHISN  (P55652), Y4XK_RHISN  (P55703), Y503_TREPA  (O83516), 
Y506_MYCPN  (P75280), Y523_MYCPN  (P75255), Y535_STAS1  (Q49ZU4), 
Y553_PASMU  (Q9CN84), Y563_RICCN  (Q92I57), Y575_WOLSU  (Q7M9Z1), 
Y582_MYCPN  (P75198), Y585_MYCPN  (P75195), Y588_MYCPN  (Q50339), 
Y590_MYCPN  (Q50337), Y5923_STRAW (Q82AY2), Y592_MYCPN  (Q50335), 
Y611_MYCPN  (P75184), Y615_AQUAE  (O66867), Y637_RICFE  (Q4ULT5), 
Y639_MYCPN  (P75158), Y640_MYCPN  (P75157), Y641_MYCPN  (P75156), 
Y642_MYCPN  (P75155), Y643_MYCPN  (P75154), Y644_MYCPN  (P75153), 
Y645_MYCPN  (P75152), Y646_MYCPN  (P75151), Y647_MYCPN  (P75150), 
Y650_MYCPN  (P75147), Y6531_BACAN (Q9RN00), Y654_MYCPN  (P75137), 
Y6871_STRCO (Q9L1P4), Y693_TREPA  (O83691), Y708_VIBCH  (Q9KU21), 
Y734_CHLTR  (O84739), Y839_TREPA  (O83811), Y872_METJA  (Q58282), 
Y875_CHLPN  (Q9Z731), Y877_RICBR  (Q1RI56), Y878_METJA  (Q58288), 
Y922_HAEIN  (Q57457), Y938_TREPA  (O83908), Y938_XYLFA  (Q9PEU0), 
Y958_LEIXX  (Q6AFL2), Y983_CAMJE  (P45492), Y9F5_PSEAE  (P33641), 
YAEF_ECOLI  (P37056), YAFT_ECOLI  (P77339), YAFY_ECOLI  (P77365), 
YAJG_ECOL6  (P0ADA6), YAJG_ECOLI  (P0ADA5), YAJI_ECOLI  (P46122), 
YBAY_ECOLI  (P77717), YBBD_BACSU  (P40406), YBFN_ECOLI  (P75734), 
YBFP_ECOLI  (P75737), YBJP_ECOLI  (P75818), YC04_KLEPN  (Q48450), 
YCDA_BACSU  (O34538), YCEB_ECOLI  (P0AB26), YCEB_SALTY  (P40822), 
YCEB_SHIFL  (P0AB27), YCKB_BACSU  (P42400), YDCL_ECO57  (P64452), 
YDCL_ECOLI  (P64451), YDDW_ECO57  (P64427), YDDW_ECOL6  (Q8CW29), 
YDDW_ECOLI  (P64426), YDDW_SHIFL  (P64428), YDEK_ECOLI  (P32051), 
YDIK_BACSU  (O05524), YEAY_ECOL6  (P0AA92), YEAY_ECOLI  (P0AA91), 
YEDD_ECOLI  (P31063), YEDD_SALTY  (Q06399), YEHR_ECOLI  (P33354), 
YFGH_ECO57  (P65291), YFGH_ECOLI  (P65290), YFGL_ECOLI  (P77774), 
YFHM_ECOLI  (P76578), YFIB_ECOLI  (P07021), YFIO_ECO57  (P0AC04), 
YFIO_ECOL6  (P0AC03), YFIO_ECOLI  (P0AC02), YFJD_BACSU  (O31555), 
YFJS_ECOLI  (O52982), YGAO_BACSU  (P97029), YGDI_ECOL6  (P65293), 
YGDI_ECOLI  (P65292), YGDR_ECO57  (P65296), YGDR_ECOL6  (P65295), 
YGDR_ECOLI  (P65294), YGDR_SHIFL  (P65297), YGER_ECOLI  (Q46798), 
YGHG_ECOLI  (Q46835), YHCJ_BACSU  (P54594), YHCN_BACSU  (P54598), 
YIAD_ECOLI  (P37665), YIFL_ECO57  (P0ADN8), YIFL_ECOL6  (P0ADN7), 
YIFL_ECOLI  (P0ADN6), YIFL_SALTI  (P0A1T7), YIFL_SALTY  (P0A1T6), 
YIFL_SHIFL  (P0ADN9), YJBF_ECOLI  (P32687), YJBH_ECOLI  (P32689), 
YJFO_ECOLI  (P39297), YJHA_BACSU  (O34725), YLAJ_BACSU  (O07634), 
YLPA_YEREN  (P27461), YMBA_ECOLI  (P0AB10), YMBA_SHIFL  (P0AB11), 
YN58_BRUAB  (P0C536), YNFC_ECO57  (Q8X799), YNFC_ECOL5  (Q0THN9), 
YNFC_ECOL6  (Q8FHC4), YNFC_ECOLI  (P67553), YNFC_SALPB  (A9MZX2), 
YNFC_SALTI  (Q8Z6Z0), YNFC_SALTY  (Q8ZPJ4), YNFC_SHIFL  (P67554), 
YOE2_STRAT  (Q53684), YOJM_BACSU  (O31851), YP57_BRUA2  (Q2YJ83), 
YPDI_ECOLI  (O32528), YPLC1_STAAU (Q936F2), YPLC2_STAAU (Q936F4), 
YQEF_BACSU  (P54451), YQGU_BACSU  (P54498), YQHH_ECOLI  (P65298), 
YQHH_SHIFL  (P65299), YQIH_BACSU  (P40770), YSAB_SALCH  (Q57IG4), 
YSAB_SALPA  (Q5PLN0), YSAB_SALTI  (Q8Z2B5), YSAB_SALTY  (Q8ZL94), 
YSCJ_YEREN  (Q01251), YSCJ_YERPE  (P69972), YSCJ_YERPS  (P69973), 
YTCA_ECO57  (Q8X2V8), YTCA_ECOK1  (A1AIS9), YTCA_ECOL6  (Q8FAX0), 
YTCA_ECOLI  (A5A630), YTCA_ECOUT  (Q1R3H8), YTCA_SHIBS  (Q31TR5), 
YTCA_SHISS  (Q3YUQ3), YU36_BRUME  (Q8YDY8), YU58_BRUSU  (Q9RPX3), 
YUAE_ECOLI  (Q9JMT5), YURO_BACSU  (O32156), YXEB_BACSU  (P54941), 
YXEM_BACSU  (P54952), YY1A_XYLFA  (P58337), YYBP_BACSU  (P37488)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
BLAC_NOCAS  (Q9EZQ7), BLAC_NOCFA  (Q5YXD6), BMPA1_BORGA (Q661N6), 
BMPA2_BORGA (O31357), BMPA_BORAP  (Q0SND0), BMPA_BORBU  (Q45010), 
CSEA_STRCO  (Q9ZEP5), CYOA_BUCAI  (P57544), CYOA_BUCAP  (Q8K993), 
CYOA_BUCBP  (Q89AA3), EPSA1_RALSO (P58597), EPSA2_RALSO (Q45407), 
FLGH1_YERPS (Q66BT9), FLGH2_YERPE (Q8ZFB2), FLGH_AQUAE  (O67609), 
FLGH_BARBK  (A1UTU3), FLGH_BUCBP  (Q89AH6), FLGH_CAUCR  (P22606), 
FLGH_ERWCT  (Q6D6H3), FLGH_METFK  (Q1GZW0), FLGH_PHOPR  (Q6LTQ7), 
FLGH_RHOSH  (P58205), FLGH_SYNAS  (Q2LT21), FLGH_WOLSU  (Q7M7T1), 
GERKC_BACSU (P49941), HIFD2_HAEIN (P45993), KAPB_BACSU  (Q08429), 
LOLB_BORBR  (Q7WNY6), LOLB_BORPA  (Q7W183), LOLB_BORPE  (Q7VUG9), 
LOLB_COXBN  (A9KF01), LOLB_COXBR  (A9NAS3), LOLB_COXBU  (Q83AQ2), 
LOLB_SHEDO  (Q12QS0), LOLB_SHELP  (A3QH32), LOLB_SHESH  (A8FYZ2), 
LOLB_XYLFA  (Q9PA74), LOLB_XYLFT  (Q87A20), LPPJ_MYCTU  (Q10688), 
LPPO_MYCTU  (Q50675), LPP_SERMA   (P02938), LPQB_STRAW  (Q82DB7), 
LPQH_MYCAV  (P46733), MI43_MYCIT  (Q03490), NLPD_PSEAE  (P45682), 
NOLT_RHIFR  (P33209), NOLT_RHISN  (P55714), OXAA2_BACSU (P54544), 
RLPA_RICFE  (Q4ULW1), SMPA_BUCAI  (P57283), SMPA_BUCAP  (Q8K9V7), 
TA17_TREPA  (P29722), TBB1_NEIMB  (Q09057), TBB2_NEIMB  (Q06988), 
TBPB_NEIMA  (O68937), TBPB_NEIMB  (Q9K0V0), TMPA_TREPA  (P07643), 
Y014_HELHP  (Q7VK78), Y213_HAEIN  (P44572), YAFL_ECOLI  (Q47151), 
YSAB_ECO57  (Q8X4J1), YSAB_ECOL5  (Q0TBP2), YSAB_ECOL6  (Q8FCE8), 
YSAB_ECOLI  (Q2M7M3), YSAB_ECOUT  (Q1R535), YSAB_SHIBS  (Q31V60), 
YSAB_SHIDS  (Q328M1), YSAB_SHIFL  (Q83J37), YUFN_BACSU  (O05252)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
17KD_RICCA  (P29697), BMPA_BORAF  (P0C223), HPAA4_HELPY (Q48244), 
HPAA_HELAC  (Q47947), NLPD_YEREN  (P47764)
Sequences which could potentially belong to the set under consideration:
AGAB_VIBS7  (P48840), AMY_THECU   (P29750), ARS_ALTCA   (P28607), 
ATP6_BACPF  (P22476), BLAC_STAAU  (P00807), CDTB_SALTI  (Q8Z6A7), 
ECOTL_METFK (Q1H1S3), FKBA_AERHY  (O08437), GENK_ECOLX  (P02988), 
GERM_BACSU  (P39072), GRPA_BACPF  (Q45131), GUNB_RUMAL  (P23661), 
HCPD_HELPJ  (Q9ZMS0), HCPD_HELPY  (O24968), HPI1_DEIRA  (P56867), 
HPI2_DEIRA  (P13126), ISS_ECOLX   (P19592), MALE_PYRAB  (Q9V297), 
MALE_PYRFU  (P58300), MIP_CHLPN   (Q9Z7P3), MOXZ_PARDE  (P29903), 
MRKD_KLEPN  (P21648), MSP4_ANAMA  (Q07408), NANH_CLOSO  (P15698), 
OAPB_HAEIN  (P44416), PGBB_HELPJ  (Q9ZKY5), PGBB_HELPY  (O25534), 
PPI1_SYNY3  (P72704), PRTE_DICNO  (P19577), PSAA_YERPE  (P31522), 
RTN_ECOLI   (P76446), SPHX_SYNY3  (Q55200), TP75_TREPA  (Q01305), 
TVID_SALTI  (Q04974), UE38_DEIRA  (Q9RUE8), VIRB9_BARHE (Q6G2B3), 
VIRB9_BARQU (Q6FYW2), WTPA_METJA  (Q58586), WTPA_PYRAB  (Q9V2C4), 
WTPA_PYRFU  (Q8U4K5), WTPA_PYRHO  (O57890), WTPA_PYRKO  (Q5JEB6), 
Y028_BORBU  (O51059), Y034_TREPA  (O83077), Y1001_ARCFU (O29261), 
Y112_HELPJ  (P64654), Y1177_MYCLE (P54134), Y1180_METJA (Q58580), 
Y1192_HAEIN (P44125), Y122_HELPY  (P64653), Y123_HELPJ  (P64656), 
Y1296_HAEIN (Q57519), Y1327_HAEIN (P44163), Y1339_HAEIN (P71378), 
Y1343_MYCTU (Q11013), Y1353_ARCFU (O28918), Y135_HELPY  (P64655), 
Y1373_METJA (Q58768), Y1413_HAEIN (P44185), Y1414_METJA (Q58809), 
Y1439_METJA (Q58834), Y1442_METJA (Q58837), Y1462_HAEIN (P45217), 
Y1535_METJA (Q58930), Y157_PASMU  (Q9CP96), Y1658_HAEIN (P45301), 
Y1756_METM5 (A4G0R9), Y178_HAEIN  (P43961), Y1805_PASMU (Q9CK30), 
Y1880_METMJ (A3CWQ6), Y1994_ARCFU (O28285), Y2224_MYCTU (P65823), 
Y2248_MYCBO (P65824), Y2293_MYCTU (Q50673), Y2354_ARCFU (O30316), 
Y360_METJA  (Q57806), Y366_HAEIN  (P43988), Y389_HAEIN  (P43991), 
Y397_ARCFU  (O29850), Y409_RICPR  (Q9ZDC3), Y415_METJA  (Q57858), 
Y449_HAEIN  (P43997), Y4MB_RHISN  (P55561), Y674_PASMU  (Q9CMX6), 
Y689_BORBU  (O51632), Y780_AQUAE  (O66975), Y834_METJA  (Q58244), 
Y871_TREPA  (O83841), Y925_METM7  (A6VHR6), Y930_HAEIN  (P44077), 
Y960_HAEIN  (P44084), Y973_HAEIN  (Q57133), YBBC_ECOLI  (P33668), 
YBGL_BUTFI  (P16085), YECR_ECOLI  (P76308), YFBK_ECOLI  (P76481), 
YFEW_ECO57  (Q8XBJ0), YFEW_ECOLI  (P77619), YFUM2_BACST (Q04729), 
YGGG_ECOLI  (P25894), YHDA_ECOLI  (P13518), YHDV_ECO57  (P64623), 
YHDV_ECOLI  (P64622), YIAM_ECOLI  (P37674), YIDQ_ECOLI  (P0ADM4), 
YIDQ_SHIFL  (P0ADM5), YIDX_ECOLI  (P0ADM6), YIDX_SHIFL  (P0ADM7), 
YIIG_ECOLI  (P32151), YJEI_ECOL6  (P0AF71), YJEI_ECOLI  (P0AF70), 
YJEI_SHIFL  (P0AF72), YJIK_ECO57  (Q8XB94), YJIK_ECOK1  (A1AJL2), 
YJIK_ECOL5  (Q0T8X4), YJIK_ECOL6  (Q8FA95), YJIK_ECOLI  (P39382), 
YJIK_ECOUT  (Q1R2G9), YJIK_SHIBS  (Q31T09), YPHF_BACSU  (P39911), 
YPMR_BACSU  (P40766), YPQL_ACICA  (P07778), YQIH_ECOLI  (P77616), 
YRAK_ECOLI  (P43319), YRAP_ECO57  (P64598), YRAP_ECOL6  (P64597), 
YRAP_ECOLI  (P64596), YRPE_BACSU  (O05410), YT35_STRFR  (P20186), 
YVFO_BACSU  (O07013), YWDE_BACSU  (P39613), YXEF_BACSU  (P54945), 
YXIP_BACSU  (P42307), YZ17_AQUAE  (O66408)
False positive hits (sequences which do not belong to the set under consideration):
AC_BPT4     (P18924), AFAC_ECOLX  (P53517), AMPC_ECOLI  (P00811), 
AMPC_ENTCL  (P05364), AMYL_LACAM  (P80696), AQL1_THEAQ  (P08594), 
AQPZ1_AGRT5 (Q8UI24), AQPZ1_RHIME (Q92NM3), AQPZ2_AGRT5 (Q8UJW4), 
AQPZ2_RHIME (Q92ZW9), AQPZ_BORBR  (Q7WKG2), AQPZ_BORPA  (Q7W917), 
AQPZ_BRAJA  (Q89EG9), AQPZ_BRUA2  (Q2YR68), AQPZ_BRUAB  (P0C112), 
AQPZ_BRUME  (Q9L772), AQPZ_BRUSU  (Q8FY85), AQPZ_CHRVO  (Q7NU39), 
AQPZ_ECO57  (Q8X6K6), AQPZ_ECOL6  (P60845), AQPZ_ECOLI  (P60844), 
AQPZ_FLAJO  (Q7WVD3), AQPZ_GLOVI  (Q7NNP3), AQPZ_PHOLL  (Q7N5C1), 
AQPZ_PSEAE  (Q9HWZ3), AQPZ_PSEPK  (Q88F17), AQPZ_RHOPA  (P60925), 
AQPZ_SHEON  (Q8EHC1), AQPZ_SHIFL  (O68874), AQPZ_SYNY3  (P73809), 
AQPZ_VIBPA  (Q87MQ5), AQPZ_VIBVU  (Q8DB17), AQPZ_VIBVY  (Q7MIV9), 
ARAE_BACSU  (P96710), ARNT_ECO57  (Q8XDZ1), ARNT_ECOL6  (Q8FFL9), 
ARNT_ECOLI  (P76473), ARNT_SHIFL  (Q83KB6), AROC_HALSA  (Q9HQC2), 
ASPG2_BACSU (O34482), AZUR1_METJ  (P12334), BDBC_CHLMU  (Q9PKL7), 
BDBC_CHLPN  (Q9Z8V7), BDBC_CHLTR  (O84179), BLA1_ACTPL  (P67920), 
BLA1_HAEIN  (P67918), BLA1_PASHA  (P67919), C5501_GLOVI (Q7NI47), 
C5502_GLOVI (Q7NI46), C5621_YERPE (Q9X6B1), CAH_METTE   (P40881), 
CAPD_BACAN  (Q51693), CARB_AGRT5  (Q8UDE9), CARB_ANASP  (Q8YQL2), 
CARB_BRUME  (Q8YIC2), CARB_BRUSU  (Q8FZJ3), CARB_BUCBP  (P59448), 
CARB_CAMJE  (Q9PIL7), CARB_CAUCR  (Q9A4D6), CARB_CORGL  (P58939), 
CARB_HAEDU  (Q7VP67), CARB_HALER  (Q8RSS3), CARB_HELPJ  (Q9ZKT2), 
CARB_HELPY  (O25577), CARB_LEPIC  (Q72NF1), CARB_LEPIN  (Q8F832), 
CARB_MYCBO  (Q7U054), CARB_MYCLE  (Q9CCR2), CARB_MYCTU  (P57689), 
CARB_NEIGO  (Q59599), CARB_NEIMA  (Q9JW02), CARB_NEIMB  (Q9JXW8), 
CARB_PASMU  (Q9CKV0), CARB_PSEPK  (Q88DU6), CARB_PSESM  (Q87WP4), 
CARB_RALSO  (Q8XZ83), CARB_RHILO  (Q98I87), CARB_RHIME  (Q92PZ4), 
CARB_RHOBA  (Q7UJ58), CARB_SYNY3  (Q55756