PROSITE - Entry: PS01325

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Entry: PS01325

General information about the entry
Entry name	LYS_HYDROXYLASE
Accession number	PS01325
Entry type	PATTERN
Date	JUL-1999 (CREATED); JUL-1999 (DATA UPDATE); OCT-2008 (INFO UPDATE).
PROSITE Documentation	PDOC01028
Name and characterization of the entry
Description	Lysyl hydroxylase signature.
Pattern	P-H-H-D-[SA]-S-T-F.
Numerical results
UniProtKB/Swiss-Prot release number: 56.4, total number of sequence entries in that release: 400771. Total number of hits in UniProtKB/Swiss-Prot: 14 hits in 14 different sequences Number of hits on proteins that are known to belong to the set under consideration: 14 hits in 14 different sequences Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences Number of false hits (on unrelated proteins): 0 hits in 0 different sequences Number of known missed hits: 0 Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0 Precision (true hits / (true hits + false positives)): 100.00 % Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
Taxonomic range: Eukaryotes Maximum known number of repetitions of the pattern in a single protein: 1 `Interesting' site in the pattern: 2,iron `Interesting' site in the pattern: 4,iron VERSION: 1
Cross-references
UniProtKB/Swiss-Prot	True positive hits: PLOD1_BOVIN (O77588), PLOD1_CHICK (P24802), PLOD1_HUMAN (Q02809), PLOD1_MOUSE (Q9R0E2), PLOD1_PONAB (Q5R9N3), PLOD1_RAT (Q63321), PLOD2_HUMAN (O00469), PLOD2_MOUSE (Q9R0B9), PLOD2_RAT (Q811A3), PLOD3_HUMAN (O60568), PLOD3_MOUSE (Q9R0E1), PLOD3_PONAB (Q5R6K5), PLOD3_RAT (Q5U367), PLOD_CAEEL (Q20679) Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment

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