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Entry: PS01150

General information about the entry
Entry nameCOMPLEX1_20K
Accession numberPS01150
Entry typePATTERN
DateNOV-1995 (CREATED); DEC-2004 (DATA UPDATE); OCT-2008 (INFO UPDATE).
PROSITE DocumentationPDOC00858
Name and characterization of the entry
DescriptionRespiratory-chain NADH dehydrogenase 20 Kd subunit signature.
Pattern[GN]-x-[DE]-[KRHST]-[LIVMFA]-[LIVMF]-P-[IV]-D-[LIVMFYWA]-[LIVMFYWK]-x-P- x-C-P-[PT].
Numerical results
  • UniProtKB/Swiss-Prot release number: 56.4, total number of sequence entries in that release: 400771.
  • Total number of hits in UniProtKB/Swiss-Prot: 66 hits in 66 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 66 hits in 66 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Archaebacteria, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 13,iron_sulfur(?)
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
HYCG_ECOLI  (P16433), HYFI_ECOLI  (P77668), NDHK2_SYNY3 (P17062), 
NDHK_ADICA  (Q85FL6), NDHK_ANASP  (Q44240), NDHK_ANAVT  (Q9XBL7), 
NDHK_ANTFO  (Q31791), NDHK_ARATH  (P56756), NDHK_LOTJA  (Q9BBT7), 
NDHK_LUPLU  (P52766), NDHK_MAIZE  (P06670), NDHK_MARPO  (P06410), 
NDHK_MESVI  (Q9MUR0), NDHK_NEPOL  (Q9TKY0), NDHK_OENEH  (Q9MTP4), 
NDHK_ORYNI  (Q6ENH0), NDHK_ORYSA  (P0C341), NDHK_ORYSI  (P0C342), 
NDHK_ORYSJ  (P0C343), NDHK_PEA    (O98679), NDHK_SACHY  (Q6L395), 
NDHK_SACOF  (Q6ENV9), NDHK_SOLLC  (Q2MI96), NDHK_SOLTU  (Q2VEH3), 
NDHK_SOYBN  (P31175), NDHK_SPIOL  (Q9M3M0), NDHK_SYNY3  (P19050), 
NDHK_TOBAC  (P06409), NDHK_WHEAT  (P26304), NDUS7_ARATH (Q42577), 
NDUS7_BOVIN (P42026), NDUS7_BRAOL (P42027), NDUS7_CAEEL (Q94360), 
NDUS7_DICDI (Q54NI6), NDUS7_GORGO (Q0MQH9), NDUS7_HUMAN (O75251), 
NDUS7_MOUSE (Q9DC70), NDUS7_NEUCR (O47950), NDUS7_PANTR (Q0MQI0), 
NDUS7_PARTE (P15602), NDUS7_PONAB (Q5R4J8), NDUS7_RECAM (O21272), 
NDUS7_SOLTU (Q43844), NDUS7_TRYBB (Q26783), NQO6_PARDE  (P29918), 
NQO6_THET8  (Q56218), NUOB1_RHIME (O68853), NUOB_AQUAE  (O67334), 
NUOB_BUCAI  (P57253), NUOB_BUCAP  (Q8K9Y6), NUOB_BUCBP  (Q89AU5), 
NUOB_ECO57  (P0AFC9), NUOB_ECOL6  (P0AFC8), NUOB_ECOLI  (P0AFC7), 
NUOB_MYCBO  (P65576), NUOB_MYCTU  (P65575), NUOB_PECCC  (O85274), 
NUOB_PSEAE  (Q9I0K0), NUOB_RHOCA  (O84970), NUOB_RICBR  (Q1RJI6), 
NUOB_RICCN  (Q92ID6), NUOB_RICFE  (Q4UM06), NUOB_RICPR  (Q9ZDH2), 
NUOB_RICTY  (Q68X17), NUOB_SHIFL  (P0AFD0), Y516_METJA  (Q57936)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
2FUG;

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