PROSITE - Entry: PS00895

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Entry: PS00895

General information about the entry
Entry name	3_HYDROXYISOBUT_DH
Accession number	PS00895
Entry type	PATTERN
Date	OCT-1993 (CREATED); DEC-2001 (DATA UPDATE); OCT-2008 (INFO UPDATE).
PROSITE Documentation	PDOC00697
Name and characterization of the entry
Description	3-hydroxyisobutyrate dehydrogenase signature.
Pattern	[LIVMFY](2)-G-L-G-x-[MQ]-G-x(2)-[MA]-[SAV]-x-[SNHR].
Numerical results
UniProtKB/Swiss-Prot release number: 56.4, total number of sequence entries in that release: 400771. Total number of hits in UniProtKB/Swiss-Prot: 26 hits in 26 different sequences Number of hits on proteins that are known to belong to the set under consideration: 24 hits in 24 different sequences Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences Number of false hits (on unrelated proteins): 2 hits in 2 different sequences Number of known missed hits: 14 Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
Comments
VERSION: 1
Cross-references
UniProtKB/Swiss-Prot	True positive hits: 3HIDH_ARATH (Q9SUC0), 3HIDH_CAEEL (Q9XTI0), 3HIDH_DROME (Q9V8M5), 3HIDH_HUMAN (P31937), 3HIDH_MOUSE (Q99L13), 3HIDH_PONAB (Q5R5E7), 3HIDH_RABIT (P32185), 3HIDH_RAT (P29266), GARR_ECOL6 (P0ABQ3), GARR_ECOLI (P0ABQ2), GLXR_ECOLI (P77161), MMSB_MYCBO (P63936), MMSB_MYCTU (P63935), MMSB_PSEAE (P28811), NP60_AEDAE (Q175F8), Y1010_HAEIN (P44979), Y1503_SHEFN (O33730), Y229_SYNY3 (Q55702), Y770_MYCTU (P71825), YGBJ_ECOLI (Q46888), YIHU_ECOLI (P0A9V8), YIHU_SALTY (Q9L7S0), YIHU_SHIFL (P0A9V9), YKWC_BACSU (O34948) False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): 3HIDH_BOVIN (Q2HJD7), 3HIDH_DICDI (Q54CX6), NP60_ANOGA (Q7Q161), NP60_BOVIN (A4FUF0), NP60_CHICK (Q5ZLS7), NP60_DANRE (Q5RKN4), NP60_DROME (Q8T079), NP60_DROPS (Q29NG1), NP60_HUMAN (Q49A26), NP60_MOUSE (Q922P9), NP60_PONAB (Q5R7T2), NP60_RAT (Q5RKH0), NP60_XENTR (Q562D5), YFJR_BACSU (O34969) False positive hits (sequences which do not belong to the set under consideration): MSOX_STRAW (Q827H4), MSOX_STRSB (P40854) Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
PDB [Detailed view]	2GF2; 2I9P;

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