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PROSITE documentation PDOC00396

Glutathione peroxidases signatures and profile

Description:

Glutathione peroxidase (EC 1.11.1.9) (GSHPx) [1,2] is an enzyme that catalyzes the reduction of hydroxyperoxides by glutathione. Its main function is to protect against the damaging effect of endogenously formed hydroxyperoxides.

In higher vertebrates at least four forms of GSHPx are known to exist: a ubiquitous cytosolic form (GSHPx-1), a gastrointestinal cytosolic for (GSHPx-GI) [3], a plasma secreted form (GSHPx-P) [4], and a epididymal secretory form (GSHPx-EP). In addition to these characterized forms, the sequence of a protein of unknown function [5] has been shown to be evolutionary related to those of GSHPx's.

In filarial nematode parasites such as Brugia pahangi the major soluble cuticular protein, known as gp29, is a secreted GSHPx which could provide a mechanism of resistance to the immune reaction of the mammalian host by neutralizing the products of the oxidative burst of leukocytes [6].

Escherichia coli protein btuE, a periplasmic protein involved in the transport of vitamin B12, is also evolutionary related to GSHPx's; the significance of this relationship is not yet clear.

The catalyic site of GSHPx contains a conserved residue which is either a cysteine or, in many eukaryotic GSHPx, a selenocysteine [7]. The region around this active site residue can be used as a signature pattern. As a second signature for this family of proteins we selected a highly conserved octapeptide located in the central section of these proteins. We also developed a profile that covers the whole conserved region.

Last update:

January 2008 / Pattern updated.

Technical section:

PROSITE methods (with tools and information) covered by this documentation:

GLUTATHIONE_PEROXID_3, PS51355Glutathione peroxidase profile  (MATRIX)
Sequences known to belong to this class detected by the profile: ALL
Other sequence(s) detected in Swiss-Prot: NONE.
Domain architecture view of Swiss-Prot proteins matching PS51355
PS51355
• Retrieve an alignment of Swiss-Prot true positive hits:
  Clustal format, color, condensed view  / Clustal format, color  / Clustal format, plain text  / Fasta format
Retrieve the sequence logo from the alignment
Taxonomic tree view of all Swiss-Prot/TrEMBL entries matching PS51355
Retrieve a list of all Swiss-Prot/TrEMBL entries matching PS51355
Scan Swiss-Prot/TrEMBL entries against PS51355
view ligand binding statistics
Matching PDB structures: 1GP1 2F8A 2GS3 2HE3 ... [ALL]
GLUTATHIONE_PEROXID_1, PS00460Glutathione peroxidases active site  (PATTERN)
Consensus pattern: [GNDRC] - [RKHNQFYCS] - x - [LIVMFCS] - [LIVMF](2) - x - N - [VT] - x - [STCA] - x - [CU] - [GA] - x - [TA] [C/U is the active site residue]
Sequences known to belong to this class detected by the profile: ALL
Other sequence(s) detected in Swiss-Prot: NONE.
• Retrieve an alignment of Swiss-Prot true positive hits:
  Clustal format, color, condensed view  / Clustal format, color  / Clustal format, plain text  / Fasta format
Retrieve the sequence logo from the alignment
Taxonomic tree view of all Swiss-Prot/TrEMBL entries matching PS00460
Retrieve a list of all Swiss-Prot/TrEMBL entries matching PS00460
Scan Swiss-Prot/TrEMBL entries against PS00460
view ligand binding statistics
Matching PDB structures: 1GP1 2HE3 2I3Y 2OBI ... [ALL]
GLUTATHIONE_PEROXID_2, PS00763Glutathione peroxidases signature 2  (PATTERN)
Consensus pattern: [LIV] - [AGD] - F - P - [CS] - [NG] - Q - F
Sequences known to belong to this class detected by the profile: ALL
Other sequence(s) detected in Swiss-Prot: NONE.
• Retrieve an alignment of Swiss-Prot true positive hits:
  Clustal format, color, condensed view  / Clustal format, color  / Clustal format, plain text  / Fasta format
Retrieve the sequence logo from the alignment
Taxonomic tree view of all Swiss-Prot/TrEMBL entries matching PS00763
Retrieve a list of all Swiss-Prot/TrEMBL entries matching PS00763
Scan Swiss-Prot/TrEMBL entries against PS00763
view ligand binding statistics
Matching PDB structures: 1GP1 2F8A 2GS3 2HE3 ... [ALL]

References:

1 AuthorsMannervik B.
TitleGlutathione peroxidase.
SourceMethods Enzymol. 113:490-495(1985).
PubMed ID4088069
2 AuthorsMullenbach G.T., Tabrizi A., Irvine B.D., Bell G.I., Tainer J.A., Hallewell R.A.
TitleSelenocysteine's mechanism of incorporation and evolution revealed in cDNAs of three glutathione peroxidases.
SourceProtein Eng. 2:239-246(1988).
PubMed ID2976939
3 AuthorsChu F.F., Doroshow J.H., Esworthy R.S.
TitleExpression, characterization, and tissue distribution of a new cellular selenium-dependent glutathione peroxidase, GSHPx-GI.
SourceJ. Biol. Chem. 268:2571-2576(1993).
PubMed ID8428933
4 AuthorsTakahashi K., Akasaka M., Yamamoto Y., Kobayashi C., Mizoguchi J., Koyama J.
TitlePrimary structure of human plasma glutathione peroxidase deduced from cDNA sequences.
SourceJ. Biochem. 108:145-148(1990).
PubMed ID2229017
5 AuthorsDunn D.K., Howells D.D., Richardson J.P., Goldfarb P.S.
TitleA human cDNA sequence for a novel glutathione peroxidase-related selenopeptide, GPRP.
SourceNucleic Acids Res. 17:6390-6390(1989).
PubMed ID2771650
6 AuthorsCookson E., Blaxter M.L., Selkirk M.E.
TitleIdentification of the major soluble cuticular glycoprotein of lymphatic filarial nematode parasites (gp29) as a secretory homolog of glutathione peroxidase.
SourceProc. Natl. Acad. Sci. U.S.A. 89:5837-5841(1992).
PubMed ID1631065
7 AuthorsStadtman T.C.
TitleSelenium biochemistry.
SourceAnnu. Rev. Biochem. 59:111-127(1990).
PubMed ID2142875
DOI10.1146/annurev.bi.59.070190.000551

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